Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1220 ATGTTACCCAACTCCACTTCTCGGCGTGTCCCCTCTTTTCTGTTCCTCCTCTGTCTCATCTCCATCCTCCTCGGCGTCGAATCCGATGAACCAGAACGTCAAATTCTGCTAAACCTCAAGGCCGCACTTGAGACCTCCAACCCCAGCGTCTTCCTCTCATGGAGCGCTTCCAATCCCTTATGCAATTTCAACGGAGTCACGTGCGACGCAGAGGGTTCAGTCAACGAAATCGATCTTTCCCGTCACAAGCTATCTGGGGTTCTTCCTCTTGACTCCATTTGCGACCTCAAGTCTCTCCAGAAGCTTTCCTTCGGGTTCAACTCCTTGTATGGAAACATCTCACAGGGCTTGAAAAACTGCGTCAATTTGGTGTATCTAGATTTGGGCAACAACGATTTCTCAGGGCCATTCCCTGATATATCTCCTCTGAAACAATTGCAGTATTTGTATTTGAATCAGAGTGGGTTCTCTGGAACTTTTCCATGGAAGTCGCTTCGAAACATGACGAGTCTTGTGGCGTTGAGCGTTGGAGATAATCCGTTCGAGTTAACTCCTTTTCCTTCTGAAGTTGTGAAGCTCAAGAACTTGAGGTTGTTATATCTGAGCAACTGTTCGCTTAATGGGAACATACCAGCGGGAATCGGTGATCTCACGGAGCTTGCACATTTGGAATTTTCCGATAACTTCATCTCCGGGGAGATTCCACCGGAGATTGGGAATCTTCGGAAGTTATGGATGTTTGAGCTGTACAACAATTCTTTCACCGGGAAGCTTCCGATTGGGCTGAGAAACCTCACGGCGTTAGAGTTTTTCGACGCGTCGATGAATAATTTTGACGGCGACCTCTCTGAACTTAAATTCTTGAGTAATCTGGTTTCTCTGCAACTATTCGAAAACGACTTTTCCGGGGAGATTCCGGCGGAGTTGGGTGAGTTTAAAAAGCTCACGAATTTGTCTTTGTACAGGAACAGATTGACAGGGCATATTCCTCAGAAGATTGGATCCTGGGCCGAGTTCGATTTTATCGACGTGTCCGAGAATTTCTTGAGGGGTCCTATTCCTCCAGATATGTGCAAGAAGGGGAAGATGCACGGCCTCCTCGTGCTTCAGAACAAGCTCACCGGAGAAATTCCGACAACTTACGAGAACTGTTTGACTCTGCAACGTTTCAGAGTGAGCAACAACTCCCTCTCCGGCACTGTCCCTCCTGGGATTTGGGGACTGCCGAACCTAGATATCATCGACATTGAATTGAATCAATTGGAAGGTTCGATTACTTCAGATATCAAGAACGCCAAGGCTCTGGCTCAGATATACGCCAGAAGGAATCTCTTGTCCGGTGAGATACCAGAGGATATTTCAAAAGCCAACTCTCTGGTCACAATCGACTTGAGCGAGAATCAAATTTCCGGGAAAATTCCGGTGGGTATCGGCGAGCTCAAGCAATTAAGCAGTATTAATTTACAGAGCAACAAGCTCTCTGGGTCAATCCCAGATTCTCTGGGTTCGTGTGGTTCCCTCAGCGACATCGAACTTTCACAAAATTCACTATCCGGTAAAATGCCTTCGTCTCTGGGTTCTCTTCCAGCTCTTAACTCTCTGAACCTGTCCAAAAACGAACTCTCCGGCGAGATTCCGGCGAGTTTCGCCCGCCTCAGATTGAGCCTCTTTGATCTGTCGGACAACAAATTAACGGGGCCAATCCCACAGGCTCTGTCTATTGAAGCTTACAACGGAAGCCTCAGCGGAAACCCAGGTCTCTGCACCTTCGACTTCGACGTCGTCTCCTTCAAGCGATGCTCTGCAAAATCCGACGTCCCCAGATACATCCGTACACTCATCATCTGCTTCTTCATCGGCATCATCATTCTCCTGCTCTGCGTCGCCCTCTACTTGCAGCTGAAGAAGAAGGAGGAGAAATCCCGAGAACGCTCCCTAAAGGAGGAATCCTGGGACATAAAATCCTTCCACGTGCTCACTTTCACAGAGGACGAGATTCTGGATTCCATCAAGCAGGAGAATCTCATAGGCAAAGGCGGCTCCGGGAACGTCTACAGAGTGACCCTCTCAAACGGCAAGGACCTCGCCGTGAAGCACATCTGGAACACCGACTCCGGCGGCCGGAAAACCTTCCGGAGCATGAGCAGCACTCCGATGCTCGGAAAACAAGAAAGCAAGAAATCCAAGGAATTCGACGCGGAAGTGGAGGCGTTGAGCTCGATAAGACACGTGAACGTGGTGAAGCTGTATTGCAGCATAACGAGCGAGGACTCGAGTCTGCTGGTGTACGAGTATTTGCCGAACGGGTCTCTGTGGGAGAGGATGCACGCGAGCGAGAAGATGGAGCTGGACTGGGAGACAAGGTACGAGATTGCCGTCGGGGCAGCGAAGGGGTTGGAGTATCTGCATCATGGCTGCGAGAGGCCAGTGATTCACAGGGATGTGAAGTCGAGTAACATTTTGTTGGATGAGTTTCTGAAGCCCAGGATTGCGGATTTTGGGTTGGCTAAGATTGTTGAGGCCAACGTTGGGAAGGATTCTAAATCTACGCATGTTGTTGCCGGGACTCATGGCTATATTGCTCCTGAATATGGATACACATACAAAGTGACCGAGAAGAGCGACGTGTACAGCTTCGGAGTGGTGCTGATGGAGCTAGTCACAGGGAAAAGGCCTATAGAAGCAGAGTTCGAAGACAAGGAAGACATAGTGAGCTGGGTTTGCAGCAAAGTGCAGCAACACTCCAAAGACAGCATCGTCCAGATCATAGACTCTAAAATCCCTGAGACTTTCAGAGACGACGCCATCAAAGTCCTCAGAATCGCCATTCTCTGCACTACCAGGGTTCCCGCTCTCAGACCCACCATGCGAAGTGTGGTCCAAATGCTCGAGGACGCAGAGCCCTGTAAACTCGTCGGAATCGTCATCGGAAAAGACGACTCTCACAAGAAGACGGAAGTCGCTAAGAAATAG 2973 0.4938 MLPNSTSRRVPSFLFLLCLISILLGVESDEPERQILLNLKAALETSNPSVFLSWSASNPLCNFNGVTCDAEGSVNEIDLSRHKLSGVLPLDSICDLKSLQKLSFGFNSLYGNISQGLKNCVNLVYLDLGNNDFSGPFPDISPLKQLQYLYLNQSGFSGTFPWKSLRNMTSLVALSVGDNPFELTPFPSEVVKLKNLRLLYLSNCSLNGNIPAGIGDLTELAHLEFSDNFISGEIPPEIGNLRKLWMFELYNNSFTGKLPIGLRNLTALEFFDASMNNFDGDLSELKFLSNLVSLQLFENDFSGEIPAELGEFKKLTNLSLYRNRLTGHIPQKIGSWAEFDFIDVSENFLRGPIPPDMCKKGKMHGLLVLQNKLTGEIPTTYENCLTLQRFRVSNNSLSGTVPPGIWGLPNLDIIDIELNQLEGSITSDIKNAKALAQIYARRNLLSGEIPEDISKANSLVTIDLSENQISGKIPVGIGELKQLSSINLQSNKLSGSIPDSLGSCGSLSDIELSQNSLSGKMPSSLGSLPALNSLNLSKNELSGEIPASFARLRLSLFDLSDNKLTGPIPQALSIEAYNGSLSGNPGLCTFDFDVVSFKRCSAKSDVPRYIRTLIICFFIGIIILLLCVALYLQLKKKEEKSRERSLKEESWDIKSFHVLTFTEDEILDSIKQENLIGKGGSGNVYRVTLSNGKDLAVKHIWNTDSGGRKTFRSMSSTPMLGKQESKKSKEFDAEVEALSSIRHVNVVKLYCSITSEDSSLLVYEYLPNGSLWERMHASEKMELDWETRYEIAVGAAKGLEYLHHGCERPVIHRDVKSSNILLDEFLKPRIADFGLAKIVEANVGKDSKSTHVVAGTHGYIAPEYGYTYKVTEKSDVYSFGVVLMELVTGKRPIEAEFEDKEDIVSWVCSKVQQHSKDSIVQIIDSKIPETFRDDAIKVLRIAILCTTRVPALRPTMRSVVQMLEDAEPCKLVGIVIGKDDSHKKTEVAKK 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1220 990 Gene3D Transferase(Phosphotransferase) domain 1 766 972 - -
Bisa05g1220 990 FunFam Leucine-rich receptor-like protein kinase family protein 188 284 - -
Bisa05g1220 990 SUPERFAMILY Protein kinase-like (PK-like) 660 964 IPR011009 -
Bisa05g1220 990 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 766 978 - -
Bisa05g1220 990 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Bisa05g1220 990 Gene3D Phosphorylase Kinase; domain 1 654 765 - -
Bisa05g1220 990 FunFam Probable inactive receptor kinase RLK902 29 187 - -
Bisa05g1220 990 ProSiteProfiles Protein kinase domain profile. 670 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1220 990 ProSitePatterns Serine/Threonine protein kinases active-site signature. 810 822 IPR008271 GO:0004672|GO:0006468
Bisa05g1220 990 Gene3D Ribonuclease Inhibitor 363 606 IPR032675 -
Bisa05g1220 990 Gene3D Ribonuclease Inhibitor 31 184 IPR032675 -
Bisa05g1220 990 Gene3D Ribonuclease Inhibitor 185 285 IPR032675 -
Bisa05g1220 990 Gene3D Ribonuclease Inhibitor 286 362 IPR032675 -
Bisa05g1220 990 Pfam Protein kinase domain 672 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1220 990 FunFam Receptor-like protein kinase HAIKU2 653 765 - -
Bisa05g1220 990 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 21 963 - -
Bisa05g1220 990 ProSitePatterns Protein kinases ATP-binding region signature. 676 698 IPR017441 GO:0005524
Bisa05g1220 990 SUPERFAMILY L domain-like 287 597 - -
Bisa05g1220 990 SUPERFAMILY L domain-like 72 359 - -
Bisa05g1220 990 FunFam Leucine-rich repeat receptor-like protein kinase TDR 285 602 - -
Bisa05g1220 990 SMART serkin_6 670 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1220 Bisa-ChrBisa05 21337216 21341410 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1220 8 988 Receptor kinase-like Gene Family AT1G09970 62.030 0.0 1176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa05g1220 Pkinase 2.8e-43 CL0016