Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1205 ATGGAGGTGTATGATCATCATCAACATGATTTCTTGGAGGAATTACTTGCTCTGAGAAGAGAAACATGGGACGACACCGTTCCAAGTCCTTCAGAAGAGCACCCGCTTTTCTTCTCTAATAATGCTGCTTTTAACAGTTTTGACTGTTTTGATCCAAACTCATCCATTGCCTTTCTCCCTAATTCATCTTCCTCTCCTCAGAGTTTCAACAACTATTACAGTACCTTCGATGAAATTTACAGTTCATTGCTCGATGAATTCTCCACGCCCCACATCGTTGATTCATCATCCTACAACACCATTGACACCACTTCCCTTGAAACTCCTCCGTTTCTGTCTCAAGAAGACAATCCCTTGTTGTCTATGAGGGAAGAGGAGTTTCAAAGTCTGGACACCAAAACGACGTGTAAGATAGAGCCAAACGGCCAGTATTCCCCTGAAACGCCAGCTTTCAACACGGGCACTTGGAATCATCTGGAAAGAAAGAATATTCGACCCAAGAGACTCCAGGGTCAACCCTCCAAGAATCTAATGGCAGAGAGAAGAAGAAGAAAGAGACTAAACGATCGCCTCTCAATGCTCAGATCCATTGTCCCTAAGATCAGTAAGATGGACAGAACATCTATACTCGGAGACACTATAGACTACATGAAAGAACTCTTGCAGAAGATTCAAAATTTGCAGCAACAAGCAGATTTGGATTCAAACATGTTTGATGTTGAGAGAAGAAATGTGGACACAAAGGTTGAAATATGCTGTTCTGGGAAGCCAGGCTTGTTGCTATCTACGGTGAACACTCTTGAAGCCTTGGGCCTTGAGATTCAGCAATGTGTTATTAGCTGTTTCAATGATTTCGCAATGCAGGCTTCTTGCTCAGAGGATTTGGAGCAGAGGACGACAGTGAGTTCTGAAGATATAAAACAATCGTTATTTAGAGCAGCAGGATATGGAGGAAGATGTTTGTGA 966 0.4265 MEVYDHHQHDFLEELLALRRETWDDTVPSPSEEHPLFFSNNAAFNSFDCFDPNSSIAFLPNSSSSPQSFNNYYSTFDEIYSSLLDEFSTPHIVDSSSYNTIDTTSLETPPFLSQEDNPLLSMREEEFQSLDTKTTCKIEPNGQYSPETPAFNTGTWNHLERKNIRPKRLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLQKIQNLQQQADLDSNMFDVERRNVDTKVEICCSGKPGLLLSTVNTLEALGLEIQQCVISCFNDFAMQASCSEDLEQRTTVSSEDIKQSLFRAAGYGGRCL 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1205 321 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 171 220 IPR011598 GO:0046983
Bisa05g1205 321 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 71 315 - -
Bisa05g1205 321 Gene3D - 164 236 IPR036638 GO:0046983
Bisa05g1205 321 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 175 232 IPR036638 GO:0046983
Bisa05g1205 321 Pfam Helix-loop-helix DNA-binding domain 177 220 IPR011598 GO:0046983
Bisa05g1205 321 SMART finulus 177 226 IPR011598 GO:0046983
Bisa05g1205 321 CDD ACT_UUR-ACR-like 247 288 - -
Bisa05g1205 321 Coils Coil 210 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1205 Bisa-ChrBisa05 20989368 20991314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1205 139 321 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 58.824 2.68e-66 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa05g1205 HLH 6.7e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1205 05 20989368 20991314 Bisa05g1205 05 20989368 20991314 ECH