Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1186 ATGTACGGACAGGCCCCGACTATGAACATAGCCGCGCAGATCGCCGCCGGTGAAGATGAAGATGGCTCTTGCGCCGGCGCAGAGTCCATTGACAACCACCACATTCATTACGAGACCCCCGCTCTCGAAGATGGTGGAGGTGGTGGTGGTGGTGGAGGAGTTGGTGGCGTTATGGAGGATGTTACTTCCGATACTTTATACGTCTCTGGTAGTGGAGCTCCTGAAATGTCTGCCCAACGCTCCGACGATTCCAGCCAACTTACGCTCTCGTTTCGTGGCCAAGTATATGTATTCGACTCTGTTACGCCTGATAAGGTTCAAGCGGTGTTATTACTTTTGGGGGGATGTGAACTATCGTCAGGTTCGCCATGTATGGAGATAGCGCCACAAAATCAGAGGGGTGCTATGGAATATCCTGGAAGATGTAGTCAGCCACAGCGAGCAGCCTCATTAAGTAGGTTCCGTCAGAAGAGGAAAGAGCGATGCTTTGATAAGAAAGTTAGATATAGTGTACGTCAAGAAGTTGCCCTCAGGATGCACCGTAATAAGGGTCAATTTACTTCTTCTAAGAAACAAGATGGATCTAATAGTTGGGGTACAGTTCAGGAGTCAGGGCAGGATGACAGTCAATCAGAAACCTCATGTACGCATTGCGGCATAAGCTCAAAATCCACCCCAATGATGCGGCGAGGGCCATCTGGTCCGAGATCACTCTGCAATGCTTGTGGCCTGTTTTGGGCTAATAGGGGTACTTTGAGGGACCTTTCCAAGAGGAACCAAGAACATTCTCTTGTCCCTTCTGAGCAGGTTGATGAAGGTAATGAATCAGACAGTCGGACTGCCATCCCTACACACAACAGTCTTGTTACTTTCTCTGATAATGATAACCCAGCTCTGATATCTGATCGTTGA 912 0.489 MYGQAPTMNIAAQIAAGEDEDGSCAGAESIDNHHIHYETPALEDGGGGGGGGGVGGVMEDVTSDTLYVSGSGAPEMSAQRSDDSSQLTLSFRGQVYVFDSVTPDKVQAVLLLLGGCELSSGSPCMEIAPQNQRGAMEYPGRCSQPQRAASLSRFRQKRKERCFDKKVRYSVRQEVALRMHRNKGQFTSSKKQDGSNSWGTVQESGQDDSQSETSCTHCGISSKSTPMMRRGPSGPRSLCNACGLFWANRGTLRDLSKRNQEHSLVPSEQVDEGNESDSRTAIPTHNSLVTFSDNDNPALISDR 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1186 303 PANTHER GATA TRANSCRIPTION FACTOR 28 20 279 IPR045280 GO:0006355
Bisa05g1186 303 Gene3D - 205 264 IPR013088 GO:0006355|GO:0008270
Bisa05g1186 303 MobiDBLite consensus disorder prediction 259 303 - -
Bisa05g1186 303 ProSitePatterns GATA-type zinc finger domain. 215 242 IPR000679 GO:0006355|GO:0043565
Bisa05g1186 303 Pfam GATA zinc finger 215 251 IPR000679 GO:0006355|GO:0043565
Bisa05g1186 303 SMART tify_2 80 115 IPR010399 -
Bisa05g1186 303 ProSiteProfiles Tify domain profile. 80 115 IPR010399 -
Bisa05g1186 303 MobiDBLite consensus disorder prediction 188 228 - -
Bisa05g1186 303 MobiDBLite consensus disorder prediction 266 303 - -
Bisa05g1186 303 MobiDBLite consensus disorder prediction 180 233 - -
Bisa05g1186 303 Pfam tify domain 84 114 IPR010399 -
Bisa05g1186 303 CDD ZnF_GATA 214 260 IPR000679 GO:0006355|GO:0043565
Bisa05g1186 303 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 211 262 - -
Bisa05g1186 303 ProSiteProfiles CCT domain profile. 147 189 IPR010402 GO:0005515
Bisa05g1186 303 Pfam CCT motif 147 189 IPR010402 GO:0005515
Bisa05g1186 303 ProSiteProfiles GATA-type zinc finger domain profile. 209 268 IPR000679 GO:0006355|GO:0043565
Bisa05g1186 303 SMART GATA_3 209 262 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1186 Bisa-ChrBisa05 20467301 20476522 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1186 58 302 Tify Gene Family AT4G24470 54.317 3.39e-90 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bisa05g1186 CCT 3.8e-15 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1186 05 20467301 20476522 Bisa05g1186 05 20467301 20476522 ECH