Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bisa05g1186 | ATGTACGGACAGGCCCCGACTATGAACATAGCCGCGCAGATCGCCGCCGGTGAAGATGAAGATGGCTCTTGCGCCGGCGCAGAGTCCATTGACAACCACCACATTCATTACGAGACCCCCGCTCTCGAAGATGGTGGAGGTGGTGGTGGTGGTGGAGGAGTTGGTGGCGTTATGGAGGATGTTACTTCCGATACTTTATACGTCTCTGGTAGTGGAGCTCCTGAAATGTCTGCCCAACGCTCCGACGATTCCAGCCAACTTACGCTCTCGTTTCGTGGCCAAGTATATGTATTCGACTCTGTTACGCCTGATAAGGTTCAAGCGGTGTTATTACTTTTGGGGGGATGTGAACTATCGTCAGGTTCGCCATGTATGGAGATAGCGCCACAAAATCAGAGGGGTGCTATGGAATATCCTGGAAGATGTAGTCAGCCACAGCGAGCAGCCTCATTAAGTAGGTTCCGTCAGAAGAGGAAAGAGCGATGCTTTGATAAGAAAGTTAGATATAGTGTACGTCAAGAAGTTGCCCTCAGGATGCACCGTAATAAGGGTCAATTTACTTCTTCTAAGAAACAAGATGGATCTAATAGTTGGGGTACAGTTCAGGAGTCAGGGCAGGATGACAGTCAATCAGAAACCTCATGTACGCATTGCGGCATAAGCTCAAAATCCACCCCAATGATGCGGCGAGGGCCATCTGGTCCGAGATCACTCTGCAATGCTTGTGGCCTGTTTTGGGCTAATAGGGGTACTTTGAGGGACCTTTCCAAGAGGAACCAAGAACATTCTCTTGTCCCTTCTGAGCAGGTTGATGAAGGTAATGAATCAGACAGTCGGACTGCCATCCCTACACACAACAGTCTTGTTACTTTCTCTGATAATGATAACCCAGCTCTGATATCTGATCGTTGA | 912 | 0.489 | MYGQAPTMNIAAQIAAGEDEDGSCAGAESIDNHHIHYETPALEDGGGGGGGGGVGGVMEDVTSDTLYVSGSGAPEMSAQRSDDSSQLTLSFRGQVYVFDSVTPDKVQAVLLLLGGCELSSGSPCMEIAPQNQRGAMEYPGRCSQPQRAASLSRFRQKRKERCFDKKVRYSVRQEVALRMHRNKGQFTSSKKQDGSNSWGTVQESGQDDSQSETSCTHCGISSKSTPMMRRGPSGPRSLCNACGLFWANRGTLRDLSKRNQEHSLVPSEQVDEGNESDSRTAIPTHNSLVTFSDNDNPALISDR | 303 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bisa05g1186 | 303 | PANTHER | GATA TRANSCRIPTION FACTOR 28 | 20 | 279 | IPR045280 | GO:0006355 | |
Bisa05g1186 | 303 | Gene3D | - | 205 | 264 | IPR013088 | GO:0006355|GO:0008270 | |
Bisa05g1186 | 303 | MobiDBLite | consensus disorder prediction | 259 | 303 | - | - | |
Bisa05g1186 | 303 | ProSitePatterns | GATA-type zinc finger domain. | 215 | 242 | IPR000679 | GO:0006355|GO:0043565 | |
Bisa05g1186 | 303 | Pfam | GATA zinc finger | 215 | 251 | IPR000679 | GO:0006355|GO:0043565 | |
Bisa05g1186 | 303 | SMART | tify_2 | 80 | 115 | IPR010399 | - | |
Bisa05g1186 | 303 | ProSiteProfiles | Tify domain profile. | 80 | 115 | IPR010399 | - | |
Bisa05g1186 | 303 | MobiDBLite | consensus disorder prediction | 188 | 228 | - | - | |
Bisa05g1186 | 303 | MobiDBLite | consensus disorder prediction | 266 | 303 | - | - | |
Bisa05g1186 | 303 | MobiDBLite | consensus disorder prediction | 180 | 233 | - | - | |
Bisa05g1186 | 303 | Pfam | tify domain | 84 | 114 | IPR010399 | - | |
Bisa05g1186 | 303 | CDD | ZnF_GATA | 214 | 260 | IPR000679 | GO:0006355|GO:0043565 | |
Bisa05g1186 | 303 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 211 | 262 | - | - | |
Bisa05g1186 | 303 | ProSiteProfiles | CCT domain profile. | 147 | 189 | IPR010402 | GO:0005515 | |
Bisa05g1186 | 303 | Pfam | CCT motif | 147 | 189 | IPR010402 | GO:0005515 | |
Bisa05g1186 | 303 | ProSiteProfiles | GATA-type zinc finger domain profile. | 209 | 268 | IPR000679 | GO:0006355|GO:0043565 | |
Bisa05g1186 | 303 | SMART | GATA_3 | 209 | 262 | IPR000679 | GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bisa05g1186 | Bisa-ChrBisa05 | 20467301 | 20476522 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bisa05g1186 | 58 | 302 | Tify Gene Family | AT4G24470 | 54.317 | 3.39e-90 | 270 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-GATA | Bisa05g1186 | CCT | 3.8e-15 | CL0281 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bisa05g1186 | 05 | 20467301 | 20476522 | Bisa05g1186 | 05 | 20467301 | 20476522 | ECH |