Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1180 ATGAGCGAAGAAGAGGAGAGTTTTACGGAGACAAACTCGGCGTTTCCAGGACTTCTTCTAGACCCTGCAAAATGTGGCACGCTGGATTTACAAGATAAACAAAAACTAGTCTATGAGATTGCTCTACAGTCAAAAGATGCCCCAAATATGCTCTATTCCTTTACTCGCAAGGAGCTTCTAGAAATAATTTGTGCTGAACTCGGCAAAGAGAGGAAGTACACTGGATATACTAAGACTCAAATGATTGAATATCTTCTTAAGATAATTTCTAAGAAATCCAAGTTGCACATCATCCAAAATACTAGTCATATTGTTTCAAAAAGGAAAAGAGCACCTCCATCTCAAGATTTACATTGTCTTCCTCTGGCAAATATTAAAGAGGAAAATGTAAAATCCTTACTATGTCGGAATGTTGCATGCAAAGCTACTTTGTGTCCAGGAGATGCTTTTTGTAAAAGATGTTCTTGTTGTATTTGTCATTTTTATGATGATAACAAGGATCCTAGTTTGTGGTTGACCTGCGGTTCTGATCTACTTGATGAGAAGGAATCATGTGGAATGTCATGCCATTTACAATGTGCTTTGAGTGATAAGAAGTCTGGCATTTTGAAAGGCAGATCTGGTAAAAAGTTAGATGGAACATTCTCTTGTGTTTCTTGTGGAAAAATTAATGGATTAATGAGGACATGGAGAAAGCAATTATTGATTGCGAAAGAAGCCAGAAGAGTAGATATACTCTCTTTACGTATTTCCTTGGCTCACAGAATTCTCATAGGAACTGAGGTTTACAAAGAAGTACAGAAGATTGTAGAAGCTACTCTTAAATTGCTGAACAATGAAGTGGGGTCTCTGGATCAGGAATGTTCAAGGATGACACGTGGGATTGTCAACAGGCTCTCATGTGGTGCTGAGGTTCAGAAGTTGTGCTCTTCTGCAGTTGAATGCTTTGATTCATTGTTTTCTAACCTTTATCCCAACAGTGTGGAAATGAAAGATGCACCAACATGCTCTATTTGTTTTGAAGAGTGCCTTCCTACCTCAGTGGTCATTGTGCTAGGGTATGAAGATCATCGTTTGAAGGACTTTTTAGGCTGCAGGCTTTGGCACAGAACATCAACAATGGACTACCCAGAACAACCCACCTTCATTGTATTAAGGCCTGAAAAAAGATTTAAGTTAGAAAACCTCTATCCTTCAACTGAGTATTTTTGCAAGGCTTCTCTGTTTAGCAGCACCGGGATTCTGGGCACTGCAGAAGCTAGATGGGTAACACCTTGTAAAACCTCAGTAACTGCTTCAATATTAACTAGAATTGGCAGTGGCAGGGATCTTACAAGACATTCGCCTCGTAGATCTTCAGTTACCATTTTGGACATACATGGACAGGAGAAAGACAAAATAGTTGCTGAAAATCATCGTCACGTGGAATCTCTGAACTCTGACATCAACTTTCTCTTGGGGGACCATCCTGCTAAACATTTCTTTTTTGATAACATCAGGGGCAGGTTTGACGGGTTCCTCTTCAAGCCTCCATCATTTGAATCTCTTCCATTTAAAACTTCCACCGCAGTTTCGCCTCCCACACCTTCTAAATCCGACGAAATGAGACAGATTACTGGTTTGGGTGGTAGAAAGCGCTTGGAAGAAAATGATTATGAGTACTCTGTCAGGGTAGTCAAGTGGTTGGAGCATGAAGGTCACATTGACCAAAGCTTCAGAGTCAAATTTCTTACTTGGTTCAGCCTTAAAGCTAATCCGCAAGAGAGAAGGGTGGTAAGTGCATTTGTTGATACATTGATTGATGACCCGCCAAGCTTAGCGGATCAGCTTATGCACACCTTCATGGACGAAATATGTTGCGAGCAAAAGCCTTAG 1875 0.4043 MSEEEESFTETNSAFPGLLLDPAKCGTLDLQDKQKLVYEIALQSKDAPNMLYSFTRKELLEIICAELGKERKYTGYTKTQMIEYLLKIISKKSKLHIIQNTSHIVSKRKRAPPSQDLHCLPLANIKEENVKSLLCRNVACKATLCPGDAFCKRCSCCICHFYDDNKDPSLWLTCGSDLLDEKESCGMSCHLQCALSDKKSGILKGRSGKKLDGTFSCVSCGKINGLMRTWRKQLLIAKEARRVDILSLRISLAHRILIGTEVYKEVQKIVEATLKLLNNEVGSLDQECSRMTRGIVNRLSCGAEVQKLCSSAVECFDSLFSNLYPNSVEMKDAPTCSICFEECLPTSVVIVLGYEDHRLKDFLGCRLWHRTSTMDYPEQPTFIVLRPEKRFKLENLYPSTEYFCKASLFSSTGILGTAEARWVTPCKTSVTASILTRIGSGRDLTRHSPRRSSVTILDIHGQEKDKIVAENHRHVESLNSDINFLLGDHPAKHFFFDNIRGRFDGFLFKPPSFESLPFKTSTAVSPPTPSKSDEMRQITGLGGRKRLEENDYEYSVRVVKWLEHEGHIDQSFRVKFLTWFSLKANPQERRVVSAFVDTLIDDPPSLADQLMHTFMDEICCEQKP 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1180 624 Pfam PHD - plant homeodomain finger protein 135 255 IPR032881 -
Bisa05g1180 624 CDD PHD_VIN3_plant 155 220 - -
Bisa05g1180 624 PANTHER VIN3-LIKE PROTEIN 2-RELATED 19 453 IPR044514 GO:0010048|GO:0040029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1180 Bisa-ChrBisa05 20202072 20207056 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1180 12 424 PHD Gene Family AT4G30200 38.793 4.57e-83 271