Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1159 ATGAAAGGCGAATATGTAGAGCCCAAGGCCGAAACCCCCAATATGTTCTCCAAGCTCCATCATCACCAACACCAACACCCACATCAACACCACCCATTTGCTCACCATCCCTTTCAGCTCTCTCGCGATTCCCAAACCTCCGAGGAAGATGATAGCCGCAGCAGCGGCGGGCCCACTCCCAGCCCGGTCCAAAAGCTCATGTCCACTGACCCGGCCTCCGCCGCTGCCGATGGCTCCAGCATTGAGGTCGTCAGGCGCCCCAGGGGCCGTCCCCCGGGCTCCAAGAACAGGCCCAAGCCCCCCGTCATCATTACCCGCGACCCCGAGCCCACCATGAGCTCCTACATTCTCGAAGTCCCCGGTGGAAGCGACGTCGTCGACACGATTGCCCGCTTCTGTCGCCGCAAGAACACGGGGCTCTGTGTCCTCACGGGCTCCGGCACCGTCGCCAACGTCACCCTCCGTCAGCCGTCGACCACTCCCGGGGCCACCGTCACCTTCCACGGCCGCTTCGACATCCTATCGATTTCCGCCACCTTCCTCGCCGCCCAGCCGTCGGCAGCCTCGCCTGCGGTCCCCAACGGCTTCACCATCTCGCTTGCCGGCCCCCAGGGCCAGATCGTCGGAGGATTGGTCGCCGGCAGTCTGATGGCTGCGGGGACGGTGTTCATCATCGCCGCTTCCTTCAACAACCCGTCCTATCACAGGTTACCGGCTGAAGAAGACGTCCGGAGCTCGGTCTCCGGAGGCGAAGGGCAGTCTCCGCCTGTGTCCGGCGGGGAGAGTGGGCACGCGCCGGCGGAGTCGTGTGGGATGTCTATGTACAGCTGTCAACTACCATCGGATGTGATTTGGGCTCGACCACCACCACCACCTTACTGA 882 0.6349 MKGEYVEPKAETPNMFSKLHHHQHQHPHQHHPFAHHPFQLSRDSQTSEEDDSRSSGGPTPSPVQKLMSTDPASAAADGSSIEVVRRPRGRPPGSKNRPKPPVIITRDPEPTMSSYILEVPGGSDVVDTIARFCRRKNTGLCVLTGSGTVANVTLRQPSTTPGATVTFHGRFDILSISATFLAAQPSAASPAVPNGFTISLAGPQGQIVGGLVAGSLMAAGTVFIIAASFNNPSYHRLPAEEDVRSSVSGGEGQSPPVSGGESGHAPAESCGMSMYSCQLPSDVIWARPPPPPY 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1159 293 ProSiteProfiles PPC domain profile profile. 109 250 IPR005175 -
Bisa05g1159 293 FunFam AT-hook motif nuclear-localized protein 113 248 - -
Bisa05g1159 293 SUPERFAMILY AF0104/ALDC/Ptd012-like 111 241 - -
Bisa05g1159 293 MobiDBLite consensus disorder prediction 18 109 - -
Bisa05g1159 293 MobiDBLite consensus disorder prediction 19 35 - -
Bisa05g1159 293 CDD DUF296 115 229 IPR005175 -
Bisa05g1159 293 Gene3D - 112 246 - -
Bisa05g1159 293 Pfam Plants and Prokaryotes Conserved (PCC) domain 115 231 IPR005175 -
Bisa05g1159 293 PIRSF ESCAROLA 9 284 IPR014476 GO:0003680
Bisa05g1159 293 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 37 271 IPR014476 GO:0003680
Bisa05g1159 293 MobiDBLite consensus disorder prediction 240 268 - -
Bisa05g1159 293 MobiDBLite consensus disorder prediction 51 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1159 Bisa-ChrBisa05 19747648 19748529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1159 76 291 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 68.122 3.83e-99 290
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1159 05 19747648 19748529 Bisa05g1159 05 19747648 19748529 ECH