Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1143 ATGGCACCCAGTTTTGATTGCGTTTCAAGTCTTCTTTGTGCAGAAGACAATAATATCATTTTCGATGATCACGATTACGAGGGCACCATGGAACTATTGGAGAATTCGTGGCATCGCAGATACCATCGACTCCATGGTCGAATTCCCTACTCTGATGATGCAAATGGGTTGCCATTTCAGAGCGATGAGAGTTTGGCGTTAATGGTGGAAAAGGAGTGCCAGCACATGCCTGCTGGCGATTACTTGAATAGGCTACGGACTGGGGATTTGAACTCGGGGGACAGGAAGGAGGCCATTGATTGGATTGAAAAGGTTCGATTGCGTTTCCGTTTTGGACCTCTCTGTTCTTATTTATCCATAAACTACTTAGATCGCTTCCTATCTGCATATGAATTACCAAAAGGAAAATCCTGGTCAATGCAATTGTTGGCTGTGGCATGTTTATCTCTCGCAGCCAAACTAGAGGAGACTGAAGTTCCTATGTCTATTGATTTGCAGGTGGGTATTCCAAAGTTCATATTTGAAGCTAGAACAATTCAGAGAATGGAGCTTCTTATACTAAGCACACTGAAGTGGAGAATGCAAGCAATTACACCTTTCTCCTTCATAGACTATTTCCTATGCAAGATCAATGAAGATCAAAGTCTCCTAAGAACTTCAATCTCACAATCCATCCAACTAATATTGAAAACTGTAAGAGGGATTGATTCATTGGAATTTAGGCCATCAGAAATAGCAGCAGCAGCGGCAATATATGTTGTGGGGGAAACCCAAACAGTTAACACAGAGAAGGCAATATCTGTACTGATTCAACATGTGGAAAAGGAGAGAGTGTTGAAGTGCATTAAAATGATGCAAGAGTTGTCATCAAACAGCAGCATCAGCAGCAATAACAGCTCTTCCAGTGCTACTTCTGTTCCCCAAAGTCCAATAGGAGTGTTAGATGCAGCATGCTTGAGCGATAAAAGTGATGACATAAATGATGGATCATGTGCAAATTCTTCACTTAATAATAGCCCAGATGCTAAAAGGAGGAAGATAAACAAAACCTGTGGAGAGGAGCTATAA 1068 0.4157 MAPSFDCVSSLLCAEDNNIIFDDHDYEGTMELLENSWHRRYHRLHGRIPYSDDANGLPFQSDESLALMVEKECQHMPAGDYLNRLRTGDLNSGDRKEAIDWIEKVRLRFRFGPLCSYLSINYLDRFLSAYELPKGKSWSMQLLAVACLSLAAKLEETEVPMSIDLQVGIPKFIFEARTIQRMELLILSTLKWRMQAITPFSFIDYFLCKINEDQSLLRTSISQSIQLILKTVRGIDSLEFRPSEIAAAAAIYVVGETQTVNTEKAISVLIQHVEKERVLKCIKMMQELSSNSSISSNNSSSSATSVPQSPIGVLDAACLSDKSDDINDGSCANSSLNNSPDAKRRKINKTCGEEL 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1143 355 Gene3D - 67 283 - -
Bisa05g1143 355 SMART cyclin_7 100 188 IPR013763 -
Bisa05g1143 355 CDD CYCLIN_AtCycD-like_rpt2 197 285 - -
Bisa05g1143 355 Pfam Cyclin, C-terminal domain 197 297 IPR004367 -
Bisa05g1143 355 FunFam D2/4-type cyclin 78 190 - -
Bisa05g1143 355 Gene3D - 78 195 - -
Bisa05g1143 355 CDD CYCLIN_AtCycD-like_rpt1 94 192 - -
Bisa05g1143 355 FunFam D6-type cyclin 191 283 - -
Bisa05g1143 355 PANTHER CYCLINS 63 296 IPR039361 -
Bisa05g1143 355 SUPERFAMILY Cyclin-like 58 194 IPR036915 -
Bisa05g1143 355 MobiDBLite consensus disorder prediction 326 341 - -
Bisa05g1143 355 MobiDBLite consensus disorder prediction 324 355 - -
Bisa05g1143 355 SMART Cyclin_C_2 197 322 IPR004367 -
Bisa05g1143 355 Pfam Cyclin, N-terminal domain 65 194 IPR006671 -
Bisa05g1143 355 SUPERFAMILY Cyclin-like 179 289 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1143 Bisa-ChrBisa05 19461510 19463489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1143 68 332 Core Cell Cycle Gene Families AT2G22490 49.265 2.20e-83 256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1143 05 19461510 19463489 Bisa05g1143 05 19461510 19463489 ECH