Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1133 ATGGAATTCGACGAGCACGAAGAGCAAGAAGATATGGAGATCCCGATGTCACCGCCGGGTTACGACTCGCTCGGCAACTCGGCGACCAGGTCCAAGCTGGACGCGTCCGCAGTCGGAGCCGAGGGAGGCGCGTCCGCCGTCACGGCTGGCAGGAAAGCAGGGGCCAGGTACAGAGAATGCCAAAAGAACCACGCCGTCAGCCTCGGCGCCCACGCGGTGGACGGCTGCGGAGACTTCATCCCGGCTGGAGAAGAAGGCACGCTCGACGCGCTAAAATGCGCCGCCTGTAACTGTCACCGCAATTTCCACCGCAAGGAGACGGACGGTGAAATCACCTTGTATCAGCAGCCGCCGCCGCACCATCCGTACCACCAGCAGTTTCCGCCTTACTACCGTGCTCCGCCACCGGCCGGTTACCTCCACCACCATCTGGCAGTGCAGCCGATGGCGCTGCATCGACCGTTGGCTCTGCCGGCGACGGCGTCGGGAGGGACGTTTAGTAGAGATGAGGAGGACATGTCGAATCCGAGCAGCAGCGGCGGCGGCGGGGGAGGAGGCAGTAACGGAGGGAAGAAAAGGCATAGGACGAAGTTCACGCAGGAGCAGAAGGAGAAGATGCTGGAATTTGCGGAGCGCGTAGGATGGAGGATCCAGAAGCACGATGAAGCTGCGGTGGAGCAATTCTGTGAGGAGACTAGTGTGAAGAGACAAGTACTCAAGGTTTGGATGCACAATAACAAGAACACTCTTGGTAAGAAACCCTAA 765 0.5987 MEFDEHEEQEDMEIPMSPPGYDSLGNSATRSKLDASAVGAEGGASAVTAGRKAGARYRECQKNHAVSLGAHAVDGCGDFIPAGEEGTLDALKCAACNCHRNFHRKETDGEITLYQQPPPHHPYHQQFPPYYRAPPPAGYLHHHLAVQPMALHRPLALPATASGGTFSRDEEDMSNPSSSGGGGGGGSNGGKKRHRTKFTQEQKEKMLEFAERVGWRIQKHDEAAVEQFCEETSVKRQVLKVWMHNNKNTLGKKP 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1133 254 MobiDBLite consensus disorder prediction 167 184 - -
Bisa05g1133 254 SUPERFAMILY Homeodomain-like 177 252 IPR009057 -
Bisa05g1133 254 Pfam ZF-HD protein dimerisation region 55 107 IPR006456 -
Bisa05g1133 254 Gene3D - 176 251 - -
Bisa05g1133 254 NCBIfam homeobox domain, ZF-HD class 191 248 IPR006455 -
Bisa05g1133 254 FunFam Zinc-finger homeodomain protein 2 185 252 - -
Bisa05g1133 254 MobiDBLite consensus disorder prediction 1 45 - -
Bisa05g1133 254 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 57 106 IPR006456 -
Bisa05g1133 254 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 56 106 IPR006456 -
Bisa05g1133 254 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 37 250 - -
Bisa05g1133 254 MobiDBLite consensus disorder prediction 160 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1133 Bisa-ChrBisa05 19290898 19291662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1133 1 250 ZF-HD Transcription Factor Family AT4G24660 50.000 3.64e-72 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Bisa05g1133 ZF-HD_dimer 9.1e-29 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1133 05 19290898 19291662 Bisa09g1500 09 22084087 22084887 CCT
Bisa05g1133 05 19290898 19291662 Bisa05g1133 05 19290898 19291662 ECH