Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1125 ATGCGATATCAGATCCGTCAATCACTCGAGAAGCTACGGCCCACAGCTAAACCAACGAGGTCACATCGACATGCCCATGCTGATGCGCATACCCTATTAACACCCTCAGCCAAGAAAGCCCATTCGTGCAATTGGGAGAAGGAAATCCTCTTATCTACTGGCTTGAGGACAGCTTCGTGGTATAAAATTGCTGATCGTCTAAGAACAGATGTTATGAGGAAGAAAAGAAAAGGAAGCGAGGCAGATGCGTCCTCAAATCTGCCAGAAATTTTGACTTCAAATCATGGGAATCATGGGTCTCCATCATCAAATTTGAAATCTCATTACTCGCTAGAAGACTGTTCCAGGTTGAAGAAGAGGTGCAAAGAAGAGGCTGATGCAGAAGCTGTTGCTTCGTGTAGTAATAGGCTTGCAGGCTTTGCCACTGCTCCACCTTGTGGGACATCATCTTTGATTACACCTGGAAGAGGTCTCAAGAGGAAGATAGGATGCATTGAAGTTGCTACCCAGGTGGGCAGGAAGAAAAAGATTGAGGATGATTATGTTTCCGGCGAAACAATTGGGCAAGGCAAATTTGGATCTGTTTCATTGTGTTGGTCCAGGCTTAGTGGAGCAGAATATGCATGCAAGACTCTGAGGAAGGGGGAGGAAACAGTTCATCGAGAAGTGGAAATAATGCAACACTTATCTGGACATCCTGGAGTTGTGACACTGCAGGCAGTGTATGAAGAAGCTGAATGTTTTCACCTTGTTATGGAATTGTGCTCTGGGGGCCGATTGATCGATAGAATGGTTAAGGATGGTCCATATACAGAACAGATGGCTGCTAATGTACTCAAGGAAGTGATGTTAGTCATTAAGTATTGTCATGATATGGGAGTTGTGCACAGAGATATAAAACCTGAGAATATCTTGCTAACAACATCAGGAAAAATTAAGCTAGCAGATTTTGGTCTAGCCATGAGAGTTTCTAATGGTCAGGATTTGACTGGTTTGGCTGGAAGCCCTGCATATGTTGCCCCGGAGGTATTGTTGGGTAGCTATTCTGAGAAGGTGGATATATGGAGTGCTGGAGTTCTCCTGCACGCTCTGTTAGTTGGCGTTCTTCCATTTCAAGGCAATTCATTGGAAGCAGTATTTGAGGCTATTAAGAATGTCAAACTGGATTTTCAAAAAGGGTCGTGGGACTTGATATCGAAGCCTGCACGAGATCTTGTTGGAAGGATGCTGACAAGGGATGTTTCAGCGAGGATAACAGCAGATGAAGTACTCAGGCATCCATGGATATGGTTCTACACAGAGCCTACACTAAAAACACTGCCCATCAGAACAAAGTTGAAGCACCAAAGCGGAGCCATTTGCCGCCAGTTTGCTGCACCCGGGCCTGGGTCAGGAGGAAACAAGATAGAGGGGGGCTCCCTTAGTGATGTTTCAAGCCCGCTTTCATCCTCCGACAGTTGCAAATCAGAAGATCAGGATGATTCTGTGTTGATTGATGTGCTGGCCTCTGCAATTTCACATGTGAGGATATCCGAACCAAAGAGGAGCAGGTTGTGTGGTCCAACAGGTCCGATAGATCAGCAAGGTTCATCTAACATGAAGGCTAACAACCTCTGTAAAGCATTTTAA 1629 0.453 MRYQIRQSLEKLRPTAKPTRSHRHAHADAHTLLTPSAKKAHSCNWEKEILLSTGLRTASWYKIADRLRTDVMRKKRKGSEADASSNLPEILTSNHGNHGSPSSNLKSHYSLEDCSRLKKRCKEEADAEAVASCSNRLAGFATAPPCGTSSLITPGRGLKRKIGCIEVATQVGRKKKIEDDYVSGETIGQGKFGSVSLCWSRLSGAEYACKTLRKGEETVHREVEIMQHLSGHPGVVTLQAVYEEAECFHLVMELCSGGRLIDRMVKDGPYTEQMAANVLKEVMLVIKYCHDMGVVHRDIKPENILLTTSGKIKLADFGLAMRVSNGQDLTGLAGSPAYVAPEVLLGSYSEKVDIWSAGVLLHALLVGVLPFQGNSLEAVFEAIKNVKLDFQKGSWDLISKPARDLVGRMLTRDVSARITADEVLRHPWIWFYTEPTLKTLPIRTKLKHQSGAICRQFAAPGPGSGGNKIEGGSLSDVSSPLSSSDSCKSEDQDDSVLIDVLASAISHVRISEPKRSRLCGPTGPIDQQGSSNMKANNLCKAF 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1125 542 CDD STKc_CAMK 180 428 - -
Bisa05g1125 542 ProSiteProfiles Protein kinase domain profile. 181 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1125 542 ProSitePatterns Protein kinases ATP-binding region signature. 187 210 IPR017441 GO:0005524
Bisa05g1125 542 Gene3D Transferase(Phosphotransferase) domain 1 172 456 - -
Bisa05g1125 542 SMART serkin_6 181 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1125 542 MobiDBLite consensus disorder prediction 471 486 - -
Bisa05g1125 542 MobiDBLite consensus disorder prediction 13 29 - -
Bisa05g1125 542 MobiDBLite consensus disorder prediction 462 490 - -
Bisa05g1125 542 MobiDBLite consensus disorder prediction 73 105 - -
Bisa05g1125 542 MobiDBLite consensus disorder prediction 85 105 - -
Bisa05g1125 542 PANTHER SERINE/THREONINE-PROTEIN KINASE 167 449 - -
Bisa05g1125 542 ProSitePatterns Serine/Threonine protein kinases active-site signature. 294 306 IPR008271 GO:0004672|GO:0006468
Bisa05g1125 542 SUPERFAMILY Protein kinase-like (PK-like) 172 451 IPR011009 -
Bisa05g1125 542 FunFam Serine/threonine-protein kinase PEPKR2 172 497 - -
Bisa05g1125 542 Pfam Protein kinase domain 181 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1125 542 MobiDBLite consensus disorder prediction 11 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1125 Bisa-ChrBisa05 19198042 19201473 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1125 165 428 EF-hand Containing Proteins AT2G38910 44.000 5.51e-76 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bisa05g1125 Pkinase 8.6e-68 CL0016