Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1100 ATGGATAACTTTGATCTCAGAAAAAAGGCCAACAAGAACTCTCGTCAAAAGAAAGTAGTTAAGATTTTCCCTAGGCCTACAGCTGGACCTCTTAGACCTGTTGTTCACAGTCAAACCTTGAAATGCAACATGAAAGTCAGGGCTGGCAGAGGATTTTCCGTGGAAGAACTAAAGGCTGCTGGCATTACCAAAAAGATTGCTCCAACCGTAGGCATTGCTATTGATCATCGCCGCAGGAACCGATCTTTGGAAGAGCTTGTGAAGGTAACAGATGAGATGAAGTCATTTAAGGCTTATAACAAGCTCCGTCTCGAACGCACAAACCAACGTCATGTTGGTGCAAGGCTGAAGAAGGCGGCCGAAGCAGAAAAGGAAGACAAGAAGTGA 387 0.4496 MDNFDLRKKANKNSRQKKVVKIFPRPTAGPLRPVVHSQTLKCNMKVRAGRGFSVEELKAAGITKKIAPTVGIAIDHRRRNRSLEELVKVTDEMKSFKAYNKLRLERTNQRHVGARLKKAAEAEKEDKK 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1100 128 ProSitePatterns Ribosomal protein L13e signature. 47 61 IPR018256 GO:0003735|GO:0005840|GO:0006412
Bisa05g1100 128 PANTHER 60S RIBOSOMAL PROTEIN L13 85 128 IPR001380 GO:0003735|GO:0005840|GO:0006412
Bisa05g1100 128 FunFam 60S ribosomal protein L13 87 128 - -
Bisa05g1100 128 Pfam Ribosomal protein L13e 6 101 IPR001380 GO:0003735|GO:0005840|GO:0006412
Bisa05g1100 128 Hamap 50S ribosomal protein L13e [rpl13e]. 22 98 IPR001380 GO:0003735|GO:0005840|GO:0006412
Bisa05g1100 128 Gene3D - 88 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1100 Bisa-ChrBisa05 18859413 18860922 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1100 3 98 Cytoplasmic Ribosomal Protein Gene Family AT5G23900 65.625 9.11e-41 133