Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bisa05g1081 | ATGGCTCACCACCCGCATAACCGATCCCAGTTCGGGGACACCACCTTCACCAAAGTGTTCGTAGGAGGACTAGCTTGGGAGACACCCACTAAAGAAATGCATAAATATTTCAAGCAGTTCGGAGACATTCTTGAAGCTGTTATTATCTATGATAAGCATACTGGAAAATCTAAAGGCTACGGATTCGTAACTTTCCGTGATCCCGAGTCAGCAAGAAGAGCTTGTGCGGATCCAAAACCAGTGATAGATGGAAGAAGAACAAATTGCAATATTGCTTGTCTTGGACGGCCTCGACCTTCAACCCCGCCGAGAAGGAATATGTTAGTGCAAGGTGATGGAGGAGGCACAACACAAGAAACGCCGTCGTATAGTGGAGTTCCGACAGTGGCATCGCCGCTTCCTCTGATGTACCCAACAGTATATGGGTATCCAATCTACAGTATTGACTATGGGTATCAGTATCACCAAGGCATGCTGTACAACCCAAAGATTCAGCACCCACAGCAATACTACCAACAACTCTATGCACAGTCATATTACTATGGGTATTCTACTCAATCTCCAAGGCCCACATTTTCCACATCACATCGCTTACCACCTGCAACCTCCTCTCTTTACCAGTCTACATCCATGGAAGCCTGTCGTCCACCTCTAATAAGGCATCCTTTTCCTTCCCCTTCTGCAGATTCTCAGACTCAACGACGAAGCTCGTCGGAGACAGAAGCTGGAGTAGTTGTGACTTCAGAAGATCGACATTAA | 759 | 0.4664 | MAHHPHNRSQFGDTTFTKVFVGGLAWETPTKEMHKYFKQFGDILEAVIIYDKHTGKSKGYGFVTFRDPESARRACADPKPVIDGRRTNCNIACLGRPRPSTPPRRNMLVQGDGGGTTQETPSYSGVPTVASPLPLMYPTVYGYPIYSIDYGYQYHQGMLYNPKIQHPQQYYQQLYAQSYYYGYSTQSPRPTFSTSHRLPPATSSLYQSTSMEACRPPLIRHPFPSPSADSQTQRRSSSETEAGVVVTSEDRH | 252 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bisa05g1081 | 252 | Gene3D | - | 1 | 111 | IPR012677 | - | |
Bisa05g1081 | 252 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 19 | 76 | IPR000504 | GO:0003723 | |
Bisa05g1081 | 252 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 17 | 97 | IPR000504 | GO:0003723 | |
Bisa05g1081 | 252 | PANTHER | BOULE-RELATED | 8 | 229 | - | - | |
Bisa05g1081 | 252 | MobiDBLite | consensus disorder prediction | 216 | 252 | - | - | |
Bisa05g1081 | 252 | SUPERFAMILY | RNA-binding domain, RBD | 16 | 119 | IPR035979 | GO:0003676 | |
Bisa05g1081 | 252 | SMART | rrm1_1 | 18 | 90 | IPR000504 | GO:0003723 | |
Bisa05g1081 | 252 | MobiDBLite | consensus disorder prediction | 225 | 244 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bisa05g1081 | Bisa-ChrBisa05 | 18623513 | 18626325 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bisa05g1081 | 13 | 188 | C2H2 Transcription Factor Family | AT2G19380 | 25.989 | 4.15e-14 | 69.7 |