Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1081 ATGGCTCACCACCCGCATAACCGATCCCAGTTCGGGGACACCACCTTCACCAAAGTGTTCGTAGGAGGACTAGCTTGGGAGACACCCACTAAAGAAATGCATAAATATTTCAAGCAGTTCGGAGACATTCTTGAAGCTGTTATTATCTATGATAAGCATACTGGAAAATCTAAAGGCTACGGATTCGTAACTTTCCGTGATCCCGAGTCAGCAAGAAGAGCTTGTGCGGATCCAAAACCAGTGATAGATGGAAGAAGAACAAATTGCAATATTGCTTGTCTTGGACGGCCTCGACCTTCAACCCCGCCGAGAAGGAATATGTTAGTGCAAGGTGATGGAGGAGGCACAACACAAGAAACGCCGTCGTATAGTGGAGTTCCGACAGTGGCATCGCCGCTTCCTCTGATGTACCCAACAGTATATGGGTATCCAATCTACAGTATTGACTATGGGTATCAGTATCACCAAGGCATGCTGTACAACCCAAAGATTCAGCACCCACAGCAATACTACCAACAACTCTATGCACAGTCATATTACTATGGGTATTCTACTCAATCTCCAAGGCCCACATTTTCCACATCACATCGCTTACCACCTGCAACCTCCTCTCTTTACCAGTCTACATCCATGGAAGCCTGTCGTCCACCTCTAATAAGGCATCCTTTTCCTTCCCCTTCTGCAGATTCTCAGACTCAACGACGAAGCTCGTCGGAGACAGAAGCTGGAGTAGTTGTGACTTCAGAAGATCGACATTAA 759 0.4664 MAHHPHNRSQFGDTTFTKVFVGGLAWETPTKEMHKYFKQFGDILEAVIIYDKHTGKSKGYGFVTFRDPESARRACADPKPVIDGRRTNCNIACLGRPRPSTPPRRNMLVQGDGGGTTQETPSYSGVPTVASPLPLMYPTVYGYPIYSIDYGYQYHQGMLYNPKIQHPQQYYQQLYAQSYYYGYSTQSPRPTFSTSHRLPPATSSLYQSTSMEACRPPLIRHPFPSPSADSQTQRRSSSETEAGVVVTSEDRH 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1081 252 Gene3D - 1 111 IPR012677 -
Bisa05g1081 252 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 19 76 IPR000504 GO:0003723
Bisa05g1081 252 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 17 97 IPR000504 GO:0003723
Bisa05g1081 252 PANTHER BOULE-RELATED 8 229 - -
Bisa05g1081 252 MobiDBLite consensus disorder prediction 216 252 - -
Bisa05g1081 252 SUPERFAMILY RNA-binding domain, RBD 16 119 IPR035979 GO:0003676
Bisa05g1081 252 SMART rrm1_1 18 90 IPR000504 GO:0003723
Bisa05g1081 252 MobiDBLite consensus disorder prediction 225 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1081 Bisa-ChrBisa05 18623513 18626325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1081 13 188 C2H2 Transcription Factor Family AT2G19380 25.989 4.15e-14 69.7