Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1070 ATGCATGTCCATATATATATTGGAATATACACTCACAGCAGCACGTTCTATTCTCAGGTCTATGTTAATTCTACTAGTGCCATGGCTGACTCACTCTCAGTTATAGTTGATTCTTCACAATCTAAGCTTGGAATGTCAGTCGAAGAAGCTATGACAGAAGCAAAGTTCTCTGGTCGCATTCATGAAGCTGAAGAAGAACTCTCTCCAAATAGCTTCCAAAAGGCCTTTGCAGAGCTCGTGGGTACATATATACTAATATTTGGAGGGTGTGGAGCCGGTCTGGCCAATAAGGTGGAGCCGCTTACTATAGTAGGAGTAGCCATAGCAGCGGGTCTCTCCTTGACTGTAGCTACATATTCAGTTGGTCATGTCTCTGGTGGCCATTTCAATCCAGCAGTAACAATCGCTTTGGCCACTACTCGCCAATTTCCATTCAAACTTGTGCCGGCTTATGCGTTGTGTCAGGTGTTGGGAGCTACACTGGCGAGCCTTACCCTGAAAGTGTTGTACAGTGGGGTGGCGAATATTGGGGTGGTAGTGACTCGGCTCTCAAGTTCAACCAGTCATCTCGAAGCTATCATATGGGAAATCATAATCAGTTTTATACTAACTTTTACTATTTGCGGTGTTGCCACCGATCACAGAGGGCAGAGCAAAGATCTCGCAGGAGTTGCAATAGGCAGTGTAGTTCTGTTTAACGTCATCGTTGCTGGGCCTATCACTGGAGCTTCCATGAATCCTGCAAGGAGTTTGGGTCCAGCCATTGTCTCTGGTGATTATAAGAATATCTGGGTTTATATCATAAGCCCTATACTGGGAGGCACCATTGCTGGTATGGTTTACAGCCTCCTGAGAGTTCCCAAATCAGGTAGAAAAAGCCTGGGGAATGCAACAAGATAG 900 0.4556 MHVHIYIGIYTHSSTFYSQVYVNSTSAMADSLSVIVDSSQSKLGMSVEEAMTEAKFSGRIHEAEEELSPNSFQKAFAELVGTYILIFGGCGAGLANKVEPLTIVGVAIAAGLSLTVATYSVGHVSGGHFNPAVTIALATTRQFPFKLVPAYALCQVLGATLASLTLKVLYSGVANIGVVVTRLSSSTSHLEAIIWEIIISFILTFTICGVATDHRGQSKDLAGVAIGSVVLFNVIVAGPITGASMNPARSLGPAIVSGDYKNIWVYIISPILGGTIAGMVYSLLRVPKSGRKSLGNATR 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1070 299 Gene3D Glycerol uptake facilitator protein. 34 293 IPR023271 -
Bisa05g1070 299 Pfam Major intrinsic protein 69 281 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa05g1070 299 SUPERFAMILY Aquaporin-like 67 289 IPR023271 -
Bisa05g1070 299 PANTHER AQUAPORIN NIP2-1 55 288 IPR034294 -
Bisa05g1070 299 NCBIfam MIP family channel protein 77 281 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa05g1070 299 CDD MIP 73 284 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa05g1070 299 PRINTS Major intrinsic protein family signature 195 213 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa05g1070 299 PRINTS Major intrinsic protein family signature 73 92 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa05g1070 299 PRINTS Major intrinsic protein family signature 264 284 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa05g1070 299 PRINTS Major intrinsic protein family signature 227 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa05g1070 299 PRINTS Major intrinsic protein family signature 110 134 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa05g1070 299 PRINTS Major intrinsic protein family signature 147 166 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa05g1070 299 ProSitePatterns MIP family signature. 128 136 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1070 Bisa-ChrBisa05 18474446 18475784 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1070 73 294 Major Intrinsic Protein MIP AT5G37820 47.768 9.38e-63 199