Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1059 ATGAACATCAGTCGAAGGCAGGAAAACACTAGCAGAAATCAAAGAATCCAAGATTTGAAATTCATTATTCGATGCCAACAACAAGATCTAACAAGATCAAAGGCAGAGATCGAAGAATATAATGACGAGACCAGACGAGAACTGACGAGAAATCCGAGGAGTCTTCAAAGGTTCAAAGCTGTGTGGGTCAATTTGTCTAAGGGGGGGTTCAAAGCTGCATGGGATGACCTAGCCGACAGAGTCCAGAGTCCAGACCCAGAGACTAAAACCCTCGTGAAGTTGAGCACCTTTGCTGCCCCTCTTTCGCTCTCAGTTTACTCGCCGAACATGTCGCACTTTGGGAGATCCGGTCCTCCAGACATCAGAGACACCTATTCCCTTCTCGTCCTCAATATCACTTTCCGTACGACCGCCGACGATCTCTACCGCTTTTTTGACAAGTACGGCAAGGTCGTCGATATCTTCATTCCTAGAGACAGAAGGACTGGTGAATCACGAGGCTTCGCTTTTGTTCGTTATAAGTATGCAGACGAGGCACAGAAGGCAGTGGATAAGCTTGATGGTAAAGTCGTCGACGGAAGAGAAATTATGGTTCAATTTGCAAAATACGGACCTAATGCTGAGAAAATTCAGAAGGGCAGGATAGTGGAAACATCCTCGAAGCCAAGAGGGAGGTCAAGAAGCCGCAGCCCTCGTCCTAGGCACAGGGATGACTATAGAGACAGGGACTACAGGAGGAGAAGTCGCAGTAGAAGTAGGGAAAGATATGATCGTGACAAGTACCGTGAGAGGGACAGGGATTATCGTCGCCGAAGCAGGAGCCGCAGTGCAAGTCCTGACCGACATAAAGACTATCGGAGAGGAAGAGATGATGAGGAGCGACGAACTCGAAGCAGATCATTTGATAGTGCTTCGCCGGCTCGGCGTGGCCCCAGTCCTCGGAGAAGCCCATCTCCACACAGAAGGCCTTCTCAGGATGGACAGCATGATGTTCAAAATAGTCATGAGCAATCACCTGCCCAAAAGGATGTTTCACCAGTTGATTGTCCTATTGAGTCTCGAAGTCCATCTCGCAGATCTGATGCTGATGAATGA 1095 0.4858 MNISRRQENTSRNQRIQDLKFIIRCQQQDLTRSKAEIEEYNDETRRELTRNPRSLQRFKAVWVNLSKGGFKAAWDDLADRVQSPDPETKTLVKLSTFAAPLSLSVYSPNMSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYRFFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAVDKLDGKVVDGREIMVQFAKYGPNAEKIQKGRIVETSSKPRGRSRSRSPRPRHRDDYRDRDYRRRSRSRSRERYDRDKYRERDRDYRRRSRSRSASPDRHKDYRRGRDDEERRTRSRSFDSASPARRGPSPRRSPSPHRRPSQDGQHDVQNSHEQSPAQKDVSPVDCPIESRSPSRRSDADE 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1059 364 MobiDBLite consensus disorder prediction 231 302 - -
Bisa05g1059 364 FunFam Serine/arginine-rich splicing factor SC35 113 212 - -
Bisa05g1059 364 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN RZ1A 123 335 - -
Bisa05g1059 364 Coils Coil 23 43 - -
Bisa05g1059 364 SUPERFAMILY RNA-binding domain, RBD 102 211 IPR035979 GO:0003676
Bisa05g1059 364 Gene3D - 106 214 IPR012677 -
Bisa05g1059 364 CDD RRM_SRSF2_SRSF8 127 199 - -
Bisa05g1059 364 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 125 203 IPR000504 GO:0003723
Bisa05g1059 364 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 128 196 IPR000504 GO:0003723
Bisa05g1059 364 SMART rrm1_1 126 199 IPR000504 GO:0003723
Bisa05g1059 364 MobiDBLite consensus disorder prediction 211 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1059 Bisa-ChrBisa05 18244546 18253883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1059 123 201 Eukaryotic Initiation Factors Gene Family AT3G11400 35.443 1.74e-09 56.6