Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1050 ATGATGATTATGAGGATGACGAACCAGAATGTGGTGGCTCCGGATGTGAAATCACGAATTAACGCCATTATTGCGGTGGTGATGTCGATTTCAAACTCACCCATGTTGCCCGGAGTAGGAGTGTCGGAGTCCGTGGCAGTGCTTGGTGGGTATCTGGGGATATCCCAGAAAAAGCTAATGAAGAGGCTTGAAGATGGAGGAGGGAGGGGAGGAGCTAATAAAGCTAACGCCTGGATTGATTCAATGAGAGCTTCCTCTCCACCGCGAGTCGTTTCCACTATCCCTTCTTCTGAGAACCCAGACGAGAGTTCTTGGATTCTTCATCATCCTTCGGCGCTCGACGTGTTTGATCAGATATTATATGAATCCAAAGGAAAAAAGATTGTAACCTTTCTAGACTACGATGGAACCCTCTCCCCAATTGTTGCAGACCCGGAGAGAGCATTCATGACTAAAAAGATGAGAACAACCGTAAAGGACATAGCCAGACATTTTCCCACAGCCATCGTCAGCGGGAGGTGTACAGACAAGGTATATAACTTTGTAAAATTGGCAGAGCTGTACTACGCAGGCAGCCATGGCATGGACATAAAAGGGCCAACGAAAAATCGAAGCTCTGAGAAAGGTAACCAAGCTGTCCTGTTCCAACCTGCGAGTCAATTTTTGCCCATGATCGACGAGGTGTACAAAATCTTGGTAGAAAAAACAAAGTCTGTCCCGGGGGCTAAGGTTGAGAACAACAAATTCTGCTTGTCCGTGCACTTTCGTTGTGTTGACGAAAAGAGTTGGAGTGCATTAGCTGAACAAGTTCGATCAGTGCTCAATGAGTACCCAAAACTTAGACTTACACAAGGAAGAAAAGTGCTAGAGATCCGTCCTTCCATCAAATGGGACAAGGGCAAAGCTCTCGAGTTTTTGTTAGAGTCACTAGGATACGCAAATTCTAATGACGTCTTTCCCATCTACATTGGTGATGATAGAACTGACGAGGATGCTTTTAAGGTTCTACGCAACAGAGATCAAGGGATTGGGATCGTAGTATCTAAGGTTCCAAAAGAAACAGAGGCTTCCTACACTCTGCAAGATCCATCAGAGGTTGAGCAGTTTTTGCGGCGTTTGGTGGATTGGAAAAGGAGGAGTCAATCGAACAAGTTTAGGGATTTGTAG 1167 0.4559 MMIMRMTNQNVVAPDVKSRINAIIAVVMSISNSPMLPGVGVSESVAVLGGYLGISQKKLMKRLEDGGGRGGANKANAWIDSMRASSPPRVVSTIPSSENPDESSWILHHPSALDVFDQILYESKGKKIVTFLDYDGTLSPIVADPERAFMTKKMRTTVKDIARHFPTAIVSGRCTDKVYNFVKLAELYYAGSHGMDIKGPTKNRSSEKGNQAVLFQPASQFLPMIDEVYKILVEKTKSVPGAKVENNKFCLSVHFRCVDEKSWSALAEQVRSVLNEYPKLRLTQGRKVLEIRPSIKWDKGKALEFLLESLGYANSNDVFPIYIGDDRTDEDAFKVLRNRDQGIGIVVSKVPKETEASYTLQDPSEVEQFLRRLVDWKRRSQSNKFRDL 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1050 388 Coils Coil 386 388 - -
Bisa05g1050 388 CDD HAD_TPP 131 366 - -
Bisa05g1050 388 Pfam Trehalose-phosphatase 131 364 IPR003337 GO:0003824|GO:0005992
Bisa05g1050 388 FunFam Trehalose 6-phosphate phosphatase 224 383 - -
Bisa05g1050 388 NCBIfam HAD-IIB family hydrolase 131 337 IPR006379 -
Bisa05g1050 388 NCBIfam trehalose-phosphatase 125 374 IPR003337 GO:0003824|GO:0005992
Bisa05g1050 388 Gene3D - 128 213 IPR023214 -
Bisa05g1050 388 Gene3D - 226 387 IPR023214 -
Bisa05g1050 388 SUPERFAMILY HAD-like 131 377 IPR036412 -
Bisa05g1050 388 FunFam Trehalose 6-phosphate phosphatase 128 214 - -
Bisa05g1050 388 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 55 382 IPR044651 GO:0004805|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1050 Bisa-ChrBisa05 18008308 18011348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1050 124 375 Trehalose Biosynthesis Gene Families AT1G70290 26.296 3.65e-10 60.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1050 05 18008308 18011348 Bisa09g1566 09 23259210 23261230 CCT