Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1046 ATGGCAACTACAATGGATTTCTACAGAAGCAGACCACTTCAGTCAGATCCCTTCAGGGGTGAGCTAATGGAAGCTCTTACACCTTTTATGAAGAGTCCTTCCCCAACTCCCTCTCCTTCTCCTTCTCCCTCTCCCTCTGTAGCCTCATCTCCCTCTTCCAATTCCTCTCTGCCATCGACCTCCTACTCGCCTTCTTCTTCTTCAACCTACTTCCAAATGTCTCCCTCACTCCCTTCGCAGCCCACCTTCTATACAGATGGTTGCTCCACCTCGATGGCCCCAGTATTTCCCGACGGGCTATCCAACAGCCAGAACTTCATCGGCTTCGGGCAATCAAGCTCTGTTCTTGGCCTCAACCACCTAACCCCATCTCAGATTAACCAGATCCAAGCCCAGATCCAGCTCCAAAACCACCAGAACCTGTGCTGGCAACCAAACGCTGCCAATGGCTTCTTGAGTCCCAAACCTATTCCCATGAAGCACACGGGTATGCCTCCTAAGCCTACCAAATTATACAGAGGCGTCAGGCAACGTCATTGGGGCAAATGGGTCGCCGAGATCAGACTCCCCAAGAACCGCACGCGCCTCTGGCTCGGTACTTTCGACACCGCTGAAGAAGCCGCCCTCGCTTACGACAAGGCCGCTTACAAGCTCAGAGGTGACTTTGCCAGGCTCAACTTCCCCAACCTTCGACATCAAGGTTCCTGTGTCGGCGGGGAATTTGGGGAGTACAAGCCTCTTCACTCCTCTGTTGACGCTAAGCTCCAAGCGATCTGCGAAAGCTTGGCTGATCTGCAGAAACAGGGGAAGTCAGGGAAGCCGATGAGCTCATCTAAGAGGTCCACAGGGCGGTCGAAGTCCGGTTCGAAGGCGGCTCAGCCTAAGACGGAAACTGTTCATGAGGAGCAGTCGGTGGTCGGAGAAGCCGATCTGAAGGTGGAGCGCTCGTCCTCGCCGGCAGTGACAGAGAGCGAGGGCTCTGCGGGTTCTTCCTCTTCTCCTTTGTCAGATTTAACGTTCGCGGATCTGAATGACTGGGAGGGCGCATCGGATAACTGGAATCTGCAGAAGTACCCTTCGTATGAGATTGATTGGTCATCTCTGTGA 1107 0.5393 MATTMDFYRSRPLQSDPFRGELMEALTPFMKSPSPTPSPSPSPSPSVASSPSSNSSLPSTSYSPSSSSTYFQMSPSLPSQPTFYTDGCSTSMAPVFPDGLSNSQNFIGFGQSSSVLGLNHLTPSQINQIQAQIQLQNHQNLCWQPNAANGFLSPKPIPMKHTGMPPKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLRHQGSCVGGEFGEYKPLHSSVDAKLQAICESLADLQKQGKSGKPMSSSKRSTGRSKSGSKAAQPKTETVHEEQSVVGEADLKVERSSSPAVTESEGSAGSSSSPLSDLTFADLNDWEGASDNWNLQKYPSYEIDWSSL 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1046 368 CDD AP2 170 230 IPR001471 GO:0003700|GO:0006355
Bisa05g1046 368 ProSiteProfiles AP2/ERF domain profile. 171 228 IPR001471 GO:0003700|GO:0006355
Bisa05g1046 368 MobiDBLite consensus disorder prediction 270 294 - -
Bisa05g1046 368 FunFam Ethylene-responsive transcription factor 2 170 229 - -
Bisa05g1046 368 MobiDBLite consensus disorder prediction 1 73 - -
Bisa05g1046 368 MobiDBLite consensus disorder prediction 47 73 - -
Bisa05g1046 368 SUPERFAMILY DNA-binding domain 171 229 IPR016177 GO:0003677
Bisa05g1046 368 MobiDBLite consensus disorder prediction 317 338 - -
Bisa05g1046 368 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 4 368 - -
Bisa05g1046 368 MobiDBLite consensus disorder prediction 266 338 - -
Bisa05g1046 368 Gene3D AP2/ERF domain 171 229 IPR036955 GO:0003700|GO:0006355
Bisa05g1046 368 MobiDBLite consensus disorder prediction 32 46 - -
Bisa05g1046 368 SMART rav1_2 171 234 IPR001471 GO:0003700|GO:0006355
Bisa05g1046 368 MobiDBLite consensus disorder prediction 295 309 - -
Bisa05g1046 368 Pfam AP2 domain 172 220 IPR001471 GO:0003700|GO:0006355
Bisa05g1046 368 PRINTS Ethylene responsive element binding protein signature 194 210 IPR001471 GO:0003700|GO:0006355
Bisa05g1046 368 PRINTS Ethylene responsive element binding protein signature 172 183 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1046 Bisa-ChrBisa05 17984645 17985751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1046 1 368 AP2-EREBP Transcription Factor Family AT1G78080 51.181 1.08e-93 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa05g1046 AP2 8.5e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1046 05 17984645 17985751 Bisa09g1568 09 23277172 23278248 CCT