Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1038 ATGCGCATCACATCGCTACTCCTTAAGAGGTATCGCGGGGTTCGCCTGTCGGACCCTTTAATTGATGATACCTCTGATGAAAATCTTGAAACAAAAGAGGTGCGCGTATCTTCACAGGATCAGGCACCATGCGTCCACAGAGTGGGAATTCCTCCAAGACAGAACTTCTTCAAGGAATTCCAAGCCACTTTGAAGGAAACACTTTTTGCAGATGATCCTCTGCGCTCCTTCAAAGATCAGTCTAGAACCCGCAAGTTCATCCTCGGCACTGAGGCCGTATTCCCCATACTTAATTGGGGGAGAAGTTATAATCTTGCTAAATTTAGAGGGGATATTATAGCTGGTTTAACCATTGCAAGTCTCTGCATCCCTCAGGATATTGGATACGCAAAGCTTGCAAATTTGGATCCACAGTATGGACTATACTCCAGCTTTGTTCCTCCACTGATTTATGCTGTCATGGGTAGTTCCCGTGATATTGCAATAGGACCAGTAGCCGTGGTTTCTCTCTTGTTAGGGACCTTGCTTCAAAATGAGATTGATCCTAAAGCAAATGCAGCAGGATATCGCCGGCTTGCTTTTACAGCCACTTTTTTTGCGGGGATCACCCAGGCAACTCTTGGGGTTCTCAGGTTAGGTTTCTTGATTGACTTCCTATCACATGCTGCAATTGTTGGTTTCATGGGGGGAGCTGCCATTACAATTGCCCTTCAACAGCTCAAGGGTTTCCTTGGCATTAAAAAGTTCACAAAGAAAACTGATATTATATCTGTCATGCATTCAGTATTCTCATCAGCCCACCATGGATGGAACTGGCAGACTATATGCATTGGAGCAAGCTTTCTAGCTTTTCTTCTGTTTACCAAATATATTGGAAAGAAGAACAACAAATTGTTCTGGATACCAGCCATTGCCCCGTTGATATCTGTTGTGCTGTCCACTACTATGGTGTACTTAACCCGTGTAGATAAGCAAGGAGTTGAAATTGTAAGACACATAGAAAAAGGGATCAATCCTTCATCTGTCCATGAAATATACTTTAGTGGTGAATACCTGGGGAAAGGTTTCAGAATTGGCATGGTGGCTGGTATGATAGCATTAACAGAAGCCACAGCAATTGGAAGAACATTTGCTTCCATGAAGGACTATCAACTGGATGGAAACAAAGAAATGGTGGCTTTAGGAGCTATGAATGTCGTTGGCTCAATGACTTCCTGCTATGTGGCAACAGGTTCTTTCTCTCGGTCAGCGGTAAATTTCATGGCTGGCTGCCAAACTGCGGTTTCTAATATTGTGATGTCCGCTGTTGTGTTCTTAACCCTGAAATTTATCACGCCTCTTTTCAAGTACACTCCAAATGCCATTCTTTCTTCCATCATCATATCTGCTGTTATCAACCTTGTGGACTATAAGGCAGCAGTTCTGATATGGAAGATTGATAAATTTGATTTCGTTGCTTGCATGGGAGCCTTTTTTGGTGTTGTTTTTGCCTCGGTTGAGATAGGACTTCTAATTGCTGTCTGTATATCCTTTGCTAAAATTTTACTCCAGGTCACTAGGCCACGAACTGCTATTCTGGGGAAAATTCCTAGAACAACTGTATATCGAAATATCCGACAATACCCAGAAGCTACAAAGGTTCCTGGCGTTTTGATTGTCAGAGTTGATTCTGCAATTTATTTTTCCAACTCCAATTATGTTAAAGAAAGGATATTAAGATGGCTGATGGATGAGGAAGAAAAAGTGAAAGAAGACTACCAAACAAGAATCCAATTTTTGGTTGTTGAGATGTCACCCGTTACTGACATCGATACCAGTGGCATCCATGCCTTTGAAGAGTTATACAGAAGTCTTCAGAAGAGAGATGTTCAGCTTGTTCTGGCAAATCCTGGCCCGGTGGTGATAGACAAGCTTCACACATCCAATTTTGCAAATCTGATTGGAGAGGACAGGATCTTCCTCACAGTTGCAGATGCTGTTGCTAACTGTTCTCCTAAGCTGGCTCAGGAACCTTGA 2016 0.4271 MRITSLLLKRYRGVRLSDPLIDDTSDENLETKEVRVSSQDQAPCVHRVGIPPRQNFFKEFQATLKETLFADDPLRSFKDQSRTRKFILGTEAVFPILNWGRSYNLAKFRGDIIAGLTIASLCIPQDIGYAKLANLDPQYGLYSSFVPPLIYAVMGSSRDIAIGPVAVVSLLLGTLLQNEIDPKANAAGYRRLAFTATFFAGITQATLGVLRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKKFTKKTDIISVMHSVFSSAHHGWNWQTICIGASFLAFLLFTKYIGKKNNKLFWIPAIAPLISVVLSTTMVYLTRVDKQGVEIVRHIEKGINPSSVHEIYFSGEYLGKGFRIGMVAGMIALTEATAIGRTFASMKDYQLDGNKEMVALGAMNVVGSMTSCYVATGSFSRSAVNFMAGCQTAVSNIVMSAVVFLTLKFITPLFKYTPNAILSSIIISAVINLVDYKAAVLIWKIDKFDFVACMGAFFGVVFASVEIGLLIAVCISFAKILLQVTRPRTAILGKIPRTTVYRNIRQYPEATKVPGVLIVRVDSAIYFSNSNYVKERILRWLMDEEEKVKEDYQTRIQFLVVEMSPVTDIDTSGIHAFEELYRSLQKRDVQLVLANPGPVVIDKLHTSNFANLIGEDRIFLTVADAVANCSPKLAQEP 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1038 671 ProSitePatterns SLC26A transporters signature. 137 158 IPR018045 GO:0008271|GO:0008272
Bisa05g1038 671 Pfam STAS domain 541 659 IPR002645 -
Bisa05g1038 671 Coils Coil 576 596 - -
Bisa05g1038 671 SUPERFAMILY SpoIIaa-like 542 664 IPR036513 -
Bisa05g1038 671 CDD STAS_SulP_like_sulfate_transporter 541 656 - -
Bisa05g1038 671 ProSiteProfiles STAS domain profile. 540 663 IPR002645 -
Bisa05g1038 671 Pfam Sulfate permease family 108 488 IPR011547 GO:0016020
Bisa05g1038 671 NCBIfam sulfate permease 95 659 IPR001902 GO:0016020|GO:0055085
Bisa05g1038 671 PANTHER SULFATE TRANSPORTER 54 664 IPR001902 GO:0016020|GO:0055085
Bisa05g1038 671 Gene3D STAS domain 520 666 IPR036513 -
Bisa05g1038 671 FunFam Sulfate transporter 31 520 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1038 Bisa-ChrBisa05 17780933 17786112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1038 26 670 Inorganic Solute Cotransporters AT1G22150 76.662 0.0 999