Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1035 ATGTCTCCGTCGAATTCTCCGTGCGCGGCGTGCAAGATCCAGAGGAGGAAATGCACTCAGGACTGCGTGTTCGCGCCGTATTTTCCGCCGGACAACCCTCAGAGGTTCTCCTATGTCCACAAGGTGTTCGGCGCAAGCAACGTCTCAAAGATACTCAGCGATCTTAACCCCGCCCACCGCGAAGACGCCGTCCGATCACTCGCTTACGAAGCCGAGGCCCGTCTCCGCGACCCTGTCTACGGCTGCGTCGGCGTCATCTTCGTCCTCCAACAGAGGCTCAAGCAGGTCCAAGCAGAACTCCTCAATGCCAAAACAGAGCTCGCTTCCTATCTCGGCCCTCAGCCCGCGCTTCCGCCCCTGCAGCCTCCCAACATGATGATGCCGCCGGCGATGATGGGGATTCCGGCGAACGGGGCCCAGTTGGCCATCCGCGAGACTCAGCAGCAGCAGATCTTCGAGCCTCAGCATCACCCGTCGGCTGCTGCTGCCATGGCGACCAGAGAGCATCAAGAGATGATGCAACAGGAGATGCTGAGATTCAATGTTGCTTCGGCTTCGGCTTCTGGGAGTGGGTTTAACGAAATGCCTCACTCTGCTGAAACGTCGCCTTCAGTGGTTCTCGGCCCCTTGGCGAATCCTTTTCACATGAATCAAACGCAGCACCCAGAAAACTACCATTCTCTGCACCATCAGCTCCAGGCGCAGCTTATGCTCTCCACGCAGCAACCCGAGCAACAATCGCATCAATCATCCTTATCCCCATCGCAGCCCCAGTCGGAAAGCGAGGAGGGTAGGAGTGTTGGTCCTTCTTGTTGA 816 0.5784 MSPSNSPCAACKIQRRKCTQDCVFAPYFPPDNPQRFSYVHKVFGASNVSKILSDLNPAHREDAVRSLAYEAEARLRDPVYGCVGVIFVLQQRLKQVQAELLNAKTELASYLGPQPALPPLQPPNMMMPPAMMGIPANGAQLAIRETQQQQIFEPQHHPSAAAAMATREHQEMMQQEMLRFNVASASASGSGFNEMPHSAETSPSVVLGPLANPFHMNQTQHPENYHSLHHQLQAQLMLSTQQPEQQSHQSSLSPSQPQSESEEGRSVGPSC 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1035 271 Coils Coil 86 106 - -
Bisa05g1035 271 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Bisa05g1035 271 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
Bisa05g1035 271 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 219 - -
Bisa05g1035 271 MobiDBLite consensus disorder prediction 238 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1035 Bisa-ChrBisa05 17684949 17685764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1035 1 265 AS2 family AT5G66870 43.131 5.91e-65 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bisa05g1035 LOB 1.7e-41 No_clan