Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1017 ATGAGCAATTTGCGAACACTATGTCGGCCGCAGACACTGTTTTCCGTCATCAGTTGCAGACACCAAATTCGATTTAGGACTTCATTTCGGAATCCTAATTTTAAGTCTCGTTTGCCATCGCCATCACTATATTCCACATGGTTCGACTCTTCGGGCTTGAGTAGTAATGAGATGTGGTTTCGCGTAAATCAGAGGAGAACTGTGGCTAGGGCATCGAGCTGGACTGAGCAGAAATCCCCTTATGAAACTCTTGAACTAGAAAGAGATGCTGACGAAGATCAAATAAAAAACGCTTATAGACGCTTGGCCAAATTCTACCATCCGGATGTCTATGATGGTAGAGGAACCCTTGAGGAAGGTGAAACGGCAGAAGCTAGGTTCATCAAAATTCAAGCTGCTTATGAATTACTTATAGATCAGGAGAAGCGAAGACAATATGATATGGATAACCGAGTCAACCCAATGAAGGCATCTCAAGCATGGACGGAGTGGCTTATGAAAAAGCGAAAAGCTTTTGATCAGCGGGGTGATATGGCAATTGCTGCTTGGGCTGAGCAGCAGCAGCGCGAGTTGAATATTCGTGTGCGTCGTCTTTCTCGTTCGAAGATTGATCCAGATGAGGAAAGGAGGATCTTGGCAAGAGAAAAAAAGGCTTCTTCTGAACATTTCTCAAATACCCTGAAGAGGCATACGCTTGTATTGAAGAAGAGAGATTTGATGCGAAGAAAGGCTGAGGAAGAAAAAATGAAGACTGTCAGTCGGCTTTTGGCTGCAGAGGGTCTCGAGCTGGATTCAGACAGTGACTAG 807 0.4461 MSNLRTLCRPQTLFSVISCRHQIRFRTSFRNPNFKSRLPSPSLYSTWFDSSGLSSNEMWFRVNQRRTVARASSWTEQKSPYETLELERDADEDQIKNAYRRLAKFYHPDVYDGRGTLEEGETAEARFIKIQAAYELLIDQEKRRQYDMDNRVNPMKASQAWTEWLMKKRKAFDQRGDMAIAAWAEQQQRELNIRVRRLSRSKIDPDEERRILAREKKASSEHFSNTLKRHTLVLKKRDLMRRKAEEEKMKTVSRLLAAEGLELDSDSD 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1017 268 Coils Coil 81 101 - -
Bisa05g1017 268 FunFam Chaperone protein dnaJ 65 170 - -
Bisa05g1017 268 Gene3D DnaJ domain 66 173 IPR036869 -
Bisa05g1017 268 PANTHER CO-CHAPERONE PROTEIN DJLA 58 259 - -
Bisa05g1017 268 Pfam DnaJ domain 80 147 IPR001623 -
Bisa05g1017 268 CDD DnaJ 80 139 IPR001623 -
Bisa05g1017 268 SMART dnaj_3 78 142 IPR001623 -
Bisa05g1017 268 ProSitePatterns Nt-dnaJ domain signature. 127 146 IPR018253 -
Bisa05g1017 268 SUPERFAMILY Chaperone J-domain 73 148 IPR036869 -
Bisa05g1017 268 PRINTS DnaJ domain signature 81 99 IPR001623 -
Bisa05g1017 268 PRINTS DnaJ domain signature 99 114 IPR001623 -
Bisa05g1017 268 PRINTS DnaJ domain signature 168 187 IPR001623 -
Bisa05g1017 268 PRINTS DnaJ domain signature 122 142 IPR001623 -
Bisa05g1017 268 ProSiteProfiles dnaJ domain profile. 79 150 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1017 Bisa-ChrBisa05 17381381 17383771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1017 71 147 C2H2 Transcription Factor Family AT1G74250 38.961 3.80e-07 48.9