Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1002 ATGCATCACCTACCTCGATTTTTCGCTCACAAAAAGCAAACCAAGGGCGTGGACCCGAATAAAGCCCGAAGAAAACCCAGGCTCGATCGCAGCAATGCCGTCAAGTACGTTGAGTATGATGTTGGGTTGTCTTCGTCGTCGCTGGAGAACTCGTCTGGATCGCTTCACACTGAATCTATGGAGTCCTATGATCGAGGCAGCTTCCGAATTGTAGGAGTTGACGGTGAAATTGATAACATTTGTAGGGGTTTAGGGCTTTCGGGACCAGATGACTTCGCTATTCCGGCGGCGGCGTGGGAGGCTATGAAGGGAAAATTTTCTCCGAGTATTGCACCAAGGTTGAAGATGAACGAGTTGAACAGTCAGGAGAAGGAGGAACTAAAGGAGGATAGTCAAGTAGCTGACGAATTGGGTGACAAATTGGAAGAGAGGGTTACAATTCGAGGAGTAGCTGAGTCAACTCAAGATGGACCTGCTGAGACTAGTGGGTGCTGCATTGCTGGTGGTGGTTTTTGTGCAGGCAGTGTCGGAGGAGGTATCAAGGGTGTGCGTCCGCCGATGCTTAAGCCACCGCCTGGGGCGAGGCTTCCAGTTATTGATAACACTTTTTCCACTTGGGACATTTTAAGGGATTTTGCTCCTCAAGTTGAAGGACAATCTCTGGAAAATTACCAGGAGTTGAACTCTTCCTATGACGGCAAAGTAATACGTAGAGAAGCGGGGCAAAAAGAAGTACATAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAACGGGTAATTGAAGGCGGGGTAAGATCGAGGGCAGAAGAGGATGATAATGCAACAAGGATTGCGGAGATTGTTGCTCAGCTTTCGGCATCGTGTTCATTTACTACGTCAAACGAAGATGATTCTTCTAGCACTTTCACGGATCCTCCGTCGAATAATATATCTCCTAACGGAAGATTCAGGCCTATAATTAGGAACTGGGAGAAGGGTAGCCTTTTGGGACGTGGCTCATTTGGGTCAGTTTATGAAGGAATTTCAGGAGATGGAATCTTTTTTGCTGTAAAAGAAGTTTCACTGCTTGATCAAGGGAATGAGGGAAGGCAAAGTGTCTATTACCTAGAGCAGGAGATTGCTCTTTTGAGTCAGTTTGAACATGAGAATATAGTTCAATACTATGGCACAGAAATGAATGAATCAAAGCTGTATATCTTTCTTCAACTTGTAACTAAAGGTTCCCTTGCAAGCCTCTATCAGCAGTATAATCTTCGAGATTCCCAAGTATCTAACTACACAAGACAGATTCTGCATGGTTTGAAATATCTTCATGATCAAAGTGTGATTCACAGGGATATCAAATGTGCAAATATATTGGTAGATGCAAATGGATCTGTCAAGCTTGCAGATTTTGGATTGGCAAAGGCAACCAAATTGAATGATATTAAGTCATGCAAGGGGACAGCATTCTGGATGGCACCTGAGGTTTTGAAGAATCGAGGTTATGGACTCCCGGCTGATATATGGAGTCTGGGGTGCACAGTATTGGAGATGTTAACACGCCAAATTCCATACTCCGGCTTGGAATGTATGCAGGCATTGTTTAGAATTGGAAAAGGTGAGCGTCCTCCTATTCCCGATTCTCTTTCAAGAGATGCACGAGATTTTATTCTGCAGTGCCTTCAAGTCAATCCAGAGGATCGTCCCACTGCTTCTCAGCTCTTAAACCATCCATTTGTCCAAAGGCTACATTCCTCATCCTCTGGCTCTGCATCTCCATATATAGCTGGCAGAAGGAGTTGA 1800 0.4467 MHHLPRFFAHKKQTKGVDPNKARRKPRLDRSNAVKYVEYDVGLSSSSLENSSGSLHTESMESYDRGSFRIVGVDGEIDNICRGLGLSGPDDFAIPAAAWEAMKGKFSPSIAPRLKMNELNSQEKEELKEDSQVADELGDKLEERVTIRGVAESTQDGPAETSGCCIAGGGFCAGSVGGGIKGVRPPMLKPPPGARLPVIDNTFSTWDILRDFAPQVEGQSLENYQELNSSYDGKVIRREAGQKEVHKEEEEEEEEEEEEEEERVIEGGVRSRAEEDDNATRIAEIVAQLSASCSFTTSNEDDSSSTFTDPPSNNISPNGRFRPIIRNWEKGSLLGRGSFGSVYEGISGDGIFFAVKEVSLLDQGNEGRQSVYYLEQEIALLSQFEHENIVQYYGTEMNESKLYIFLQLVTKGSLASLYQQYNLRDSQVSNYTRQILHGLKYLHDQSVIHRDIKCANILVDANGSVKLADFGLAKATKLNDIKSCKGTAFWMAPEVLKNRGYGLPADIWSLGCTVLEMLTRQIPYSGLECMQALFRIGKGERPPIPDSLSRDARDFILQCLQVNPEDRPTASQLLNHPFVQRLHSSSSGSASPYIAGRRS 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1002 599 Coils Coil 236 267 - -
Bisa05g1002 599 FunFam Mitogen-activated protein kinase 1, putative, expressed 326 591 - -
Bisa05g1002 599 Gene3D Phosphorylase Kinase; domain 1 319 409 - -
Bisa05g1002 599 ProSiteProfiles Protein kinase domain profile. 328 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1002 599 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 194 592 - -
Bisa05g1002 599 Coils Coil 124 144 - -
Bisa05g1002 599 MobiDBLite consensus disorder prediction 295 320 - -
Bisa05g1002 599 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Bisa05g1002 599 SMART serkin_6 328 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1002 599 MobiDBLite consensus disorder prediction 248 263 - -
Bisa05g1002 599 Gene3D Transferase(Phosphotransferase) domain 1 410 591 - -
Bisa05g1002 599 SUPERFAMILY Protein kinase-like (PK-like) 303 585 IPR011009 -
Bisa05g1002 599 Pfam Protein kinase domain 329 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1002 599 MobiDBLite consensus disorder prediction 11 29 - -
Bisa05g1002 599 MobiDBLite consensus disorder prediction 240 277 - -
Bisa05g1002 599 MobiDBLite consensus disorder prediction 9 29 - -
Bisa05g1002 599 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1002 Bisa-ChrBisa05 17175784 17181272 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1002 4 581 MAP Kinase Kinase Kinase AT4G08500 47.687 2.83e-165 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bisa05g1002 Pkinase 4.2e-69 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1002 05 17175784 17181272 Bisa09g1618 09 24113256 24121446 CCT
Bisa05g1002 05 17175784 17181272 Bisa05g1002 05 17175784 17181272 ECH