Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1001 ATGTGGATGCCTTATTTGATGAATATGATGTTGCTTGTTTGTGGACCGGGTTTATGTTTTATATCTATTGGTTCTAGGCTAATATGCATGTCAATGACGTGGACGTTTGAGTATGATGTTGGGTCGTCTTCGTCTTCGTCGTCGCTGGGCTGCTCGTCTGGATCGCTCCACACTGAATCTATGGAGTTCTATGATCGAAGCAGCTTCCGAATTGTCGGAGTTGACGATGAAATTGATCACATTTGTGGGGCTTTTGGGCTTTTGGGCCCAGAGGACTTCGCTATTCCGGCGGCGGCGTGGGAGGCTATGAAGGAAAGATTATCTCCGAGTATTGCACCAAGGTTGAAGATGAACGAGTTGAACAGTCAGGCGAAGGAGGAACTAAAGGAGGATAGTCAAGTAGCGGACGAATTGGGTGACAAATTTAAAGAGAGGGTTACAATTCGAGGAGTGTCTGAGTCAACTCAAAATGTGCCTGCTGAGACTAGTGTCGGAGGAGGTATCAAGCGTGTGCGTTCGCCGATGCTTAAGCTACAGCCTGGGGCAAGGCTTCCAGTTCTTGATAACACTTTTTCCAGTTGGGACATTGTAAGGGGTTTTGCTCCTCAAGATGAAGGACAATCTCTGGAAAATTACGGGGAGTTGAATAATATATCTCCTAACGGAAGATTTAGGCCTGTAATTATGAACTGGGAGAAGGGTGACCTTTTGGGACGTGGCTCATTTGGGTCAGTTTATGAAGGAATTTCTGAAGATGGAATCCTTTTTGCTGTAAAAGAAGTTTCACTGCTTGATCAAGGGAACGAGGGAAGGCAAATTGTCTATTACCTAGAGCAGGAGATTGCTCTTTTGAGTCAGTTTGAACATGAGAATATAGTTCAATACTATGGCACAGAAATGAATGAATCAAAGCTGTATATCTTTCTTCAACTTGTAACTAAAGGTTCCCTTGCAAGTCTCTATCAGCAGTATAATCTTCGAGATTCCCAAGTATCTAACTACACAAGACAGATTCTGCATGGTTTGAAATATCTTCATGATCAATGTGTGATTCACAGGGATATCAAATGTGCAAATATATTGGTAGATGCAAATGGATCTGTCAAGCTTTCAGATTTTGGATTGGCAAAGGCAACCAAATTGAATGATATTAAGTCATGCAAGTGGACAGCATTCTGGATGGCACCTGAGTTTGTGAAGAATCAAGGTTATGGACCTCCGGTTGATATATGGAGTCTGGGTTGCACAGTATTGGAGATGTTGACACGCCAAATTCCATACTCCGGCTTGGATTCTGTGAAGCATGCAGATTTAATGTGTCAATGTTCTGAAGCTTAG 1338 0.4297 MWMPYLMNMMLLVCGPGLCFISIGSRLICMSMTWTFEYDVGSSSSSSSLGCSSGSLHTESMEFYDRSSFRIVGVDDEIDHICGAFGLLGPEDFAIPAAAWEAMKERLSPSIAPRLKMNELNSQAKEELKEDSQVADELGDKFKERVTIRGVSESTQNVPAETSVGGGIKRVRSPMLKLQPGARLPVLDNTFSSWDIVRGFAPQDEGQSLENYGELNNISPNGRFRPVIMNWEKGDLLGRGSFGSVYEGISEDGILFAVKEVSLLDQGNEGRQIVYYLEQEIALLSQFEHENIVQYYGTEMNESKLYIFLQLVTKGSLASLYQQYNLRDSQVSNYTRQILHGLKYLHDQCVIHRDIKCANILVDANGSVKLSDFGLAKATKLNDIKSCKWTAFWMAPEFVKNQGYGPPVDIWSLGCTVLEMLTRQIPYSGLDSVKHADLMCQCSEA 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1001 445 Gene3D Transferase(Phosphotransferase) domain 1 229 444 - -
Bisa05g1001 445 Pfam Protein kinase domain 232 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1001 445 ProSiteProfiles Protein kinase domain profile. 231 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1001 445 FunFam Protein kinase, putative 227 436 - -
Bisa05g1001 445 SMART serkin_6 231 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1001 445 Coils Coil 121 141 - -
Bisa05g1001 445 ProSitePatterns Protein kinases ATP-binding region signature. 237 259 IPR017441 GO:0005524
Bisa05g1001 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 350 362 IPR008271 GO:0004672|GO:0006468
Bisa05g1001 445 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 105 440 - -
Bisa05g1001 445 SUPERFAMILY Protein kinase-like (PK-like) 230 441 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1001 Bisa-ChrBisa05 17117549 17130997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1001 49 434 MAP Kinase Kinase Kinase AT4G08500 42.974 4.85e-115 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bisa05g1001 Pkinase 9.9e-59 CL0016