Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0989 ATGGAGGATTTGCAGAGTGCGCTGAAAGATCGTAATTTAATTGTTTCCACCGTCGAAGATAAGGGTCGATGTCTCTTAACGACGAGAGACTTTTACCCAGGAGAGGTAATTATAAGCCAAGATCCTTATGTATGTGTGCCAAATAAATCTTCAGTCGAAAAAAGGTGTGATGGATGTTTTGCTACAAGTAGTCTTAAGAAGTGTTCTAGATGTCAAGTTGTATGGTACTGTGGAAGCACATGTCAGAAGTTGGAATGGAATTTGCATCGTCTTGAATGTGAAGTCCTCTCAAGGCTGGACCAGGACAAGAGAAAATCTGTCACACCATCCATTCGACTGATGATAAAACTTTATCTTAGAAGGAAGTTGCAAAGTGAGAAGATTATCCCAATCACTGCTACAGACAACTATATCTTGGTGGAGGCATTAGTGGCACATATGTCTGACATCAATGAAGAACAGCTAGTGCTGTATGCACAGATGGCTAATCTTGTAAACTTAATACTACAGTGGCCTGAAATCAACATAAAAGAGATTACAGAAAATTTTTCCAAGTTTGCATGCAATGCACATACCATTTGTGACAGTGAACTGAGACCCCTGGGGACAGGATTGTATCCCATAATTTCCATAATCAACCACAGTTGCTTGCCCAATTCTGTGCTGGTTTTTGAGGGAAGGGTAGCTGTAGTACGTGCTGTGCAACATATTCCCAAAGGTTCTGAGGTGCTGATAAGTTATATAGAGACTGCTGGAAGCACTATGACTCGGCAGAAGGCTCTGAAAGAGCAGTACCTATTCACTTGCACATGTCCCCGCTGTGTTAAAGCGGGCCAATATGATGATATTCAAGAAAGTGCAATTTTGGAAGGATACAGATGCAAGAAGGAAAATTGCTGTGGTTTCTTGCTTCGTACAAATGATGGAAAGGGATTCCAATGCCAAGAATGTGGACTAGTCAGGGAAATGGAAGAGGTAAAGAAGATTGCAACTGAAGTAAAATCACTATCAGAAAACAAAGCTCTTAAAAATTTTTCCATTGGCAATTATCAGGAAGCTTTTACCATATACAAAATGATTGAGAAACTCCAAACAGAATTGTACCCTCCTTTCTCAATCAACTTGATGCAAACTCGAGAAAAGCTTTTAAAGTTATTGATGGAGATGGAACGTTGGAGAGAAGCTCTGGCGTACTGCAAATTGACCTTACCAGTCTATCAAAGAGTTTATCCAGCAGTTCATCCTTTGCTTGGTTTGCAATATTATACTTGTGGAAAACTTGAATGGTATCTTGGGGACACTGAGGGTGCTGTTAAATCACTGACCAAGGCAATGGATATTCTAAGAATTACTCATGGGACAAATACACCCTTCATGAAAGAACTATTGATGAAGTTAGAAGAAGCCCGAGCTGAAGCCTCTTACCAACAGTCCTCCAAAGACGAGTAG 1449 0.4044 MEDLQSALKDRNLIVSTVEDKGRCLLTTRDFYPGEVIISQDPYVCVPNKSSVEKRCDGCFATSSLKKCSRCQVVWYCGSTCQKLEWNLHRLECEVLSRLDQDKRKSVTPSIRLMIKLYLRRKLQSEKIIPITATDNYILVEALVAHMSDINEEQLVLYAQMANLVNLILQWPEINIKEITENFSKFACNAHTICDSELRPLGTGLYPIISIINHSCLPNSVLVFEGRVAVVRAVQHIPKGSEVLISYIETAGSTMTRQKALKEQYLFTCTCPRCVKAGQYDDIQESAILEGYRCKKENCCGFLLRTNDGKGFQCQECGLVREMEEVKKIATEVKSLSENKALKNFSIGNYQEAFTIYKMIEKLQTELYPPFSINLMQTREKLLKLLMEMERWREALAYCKLTLPVYQRVYPAVHPLLGLQYYTCGKLEWYLGDTEGAVKSLTKAMDILRITHGTNTPFMKELLMKLEEARAEASYQQSSKDE 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0989 482 Gene3D - 55 105 - -
Bisa05g0989 482 Gene3D Tetratricopeptide repeat domain 402 481 IPR011990 GO:0005515
Bisa05g0989 482 Pfam SET domain 22 247 IPR001214 GO:0005515
Bisa05g0989 482 Coils Coil 375 395 - -
Bisa05g0989 482 Gene3D SET domain 24 274 IPR046341 -
Bisa05g0989 482 ProSiteProfiles SET domain profile. 11 248 IPR001214 GO:0005515
Bisa05g0989 482 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 16 468 - -
Bisa05g0989 482 Coils Coil 319 339 - -
Bisa05g0989 482 ProSitePatterns Zinc finger MYND-type signature. 56 93 IPR002893 -
Bisa05g0989 482 SUPERFAMILY SET domain 10 247 IPR046341 -
Bisa05g0989 482 Pfam MYND finger 56 93 IPR002893 -
Bisa05g0989 482 Gene3D - 106 190 - -
Bisa05g0989 482 SMART set_7 11 254 IPR001214 GO:0005515
Bisa05g0989 482 SUPERFAMILY TPR-like 339 447 IPR011990 GO:0005515
Bisa05g0989 482 ProSiteProfiles Zinc finger MYND-type profile. 56 93 IPR002893 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0989 Bisa-ChrBisa05 16936090 16943105 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bisa05g0989 SET 2.7e-13 No_clan