Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0988 ATGAAATGCCGTGGAGATTTCTCCATGGATGGGAAGGCTAACCTTCCGGACCCGCCCCCAACTGTGAAGAACCTGATCCGCCCAGTCAATCCCGACACTACATCGTCTTCCTCATCGTCCTTCTCCTCTTCCTCGCCGCCGGACTTCCTTCGGCATGTTCAAGCCGCCTTTAAGCGCCATCGCCCTCTAGGCACAGTGCAATCAAATATTAGGCCAAGGCGCATAATGGTTCCTCAATTAGAGGTGAAAAGAAGTTCTACGTTGAAAATTGATCCAACTGTAGATACTAAGAACTCTCAAGGCATATCATTAAATAAAGGTCAGTTGGAGAAGGAGTCACTTGCACATAGAAAGTGTACAACCTCTATAATGGGGGAGGGTCAAGAGGATGCAACAATCACGCCTCCTCCGGTTTCTGGTACTTGCAAGAATGCATTTGATGGAGGATGCAATGCACATGAATGTCATCCTAATGTAATGACTAATTGCAAAGACAAGATTATTATGCCTCCTTCGCAAGTGGAATCTCAAAATGTAGATGGTCAGAAGAAAGTCCAGTTCTCACTTGGAAACAACACTACTGCCCAGGGGGCCAATGATGGAAAGGCCATTGAGTTGGAGAACTTATCATCTCATATGGGTTCACTTGCATTGACAGAAATGGAATGGGCCGCAAGCAGCCAGCTGGAAGAATCTAATGGATTCAATCAAGATTCAAAGAACCAAAGTATTTTACAGGCAGAGTCTGAGTTAAGTTTGAGATCTGATGGAGGATTAAGTTCCCAATTAGTAAAGAGAACAACGGCTATTCAGGATCATCTGCAGCAATTTAGAAACTTTTTAAGCCAGCCAGCTACTCAATCTTCAGTAGCAGGACCTTCATGTGCTACGACAACATCATTGCATGCATCTTCAGTTCCTATGCTAAATTCGACAACTCATTGTTCTCAACCACATCTAGATTGTGGCTCACATGTGGCAGCAGAAACTTTGAGAGACAGTAATGTTAATTCTCATCCTGTAACCCAAGGGGCTGTGAAGTCATCAAATTCTTCCCTGAAAGAGATGGCAGTTGCATTCCAAGCTTCTAGTTCTGCCATTAATGCGGGGTCAGCATTTAAGGATGCTGACCCATGTAAGGAGCAGCAAGGCAGCATGTTAAAGGAAACTAACATTCCTAAAAGTACTTATTATCATGATGATAAGTCAACTATGGGGAAAGAGTCTGCAGATGTTACCAACATACAATCTCAGGCACCAATGTCCAGAGCCTCATCTTCAGATGTGAAGTTGGAGTCTTCTAAGTTAGAAAAGCCAGAGAAGGCAGCAAGCAGTAAAGGTGCATCAGCTGCTCGGAAGAGGACGTATGACCCTGATTTGTTCTTCAAAGTAAATGGCAAGCTCTATCAAAGGCTCGGCAAGATAGGTAGTGGAGGAAGCAGTGAAGTACACAAAGTAATTTCATCAGACTGTACAATCTATGCGCTTAAAAAGATCAAGCTAAAGGGTCGTGATTATGCCACTGCATTTGGGTTTTGTCAAGAGATTGAGTATCTAAATAGGCTGAAGGGAAAGAATAATATTATACAGCTGATTGACTATGAGGTGACTGACAAGGCTTTGCTTGCGGAAGTCATGCAAGGCTCTGTGAGTAATAAGGATGGCCGAGTCAAGGATGATGGATATATATACATGGTGCTTGAATACGGGGAAATTGATTTGGCTCACATGCTATCCCAGAAGTGGAAGGAACTGTATGAATACAACCGGACCATAGATGAGAACTGGCTTCGATTTTATTGGCAGCAAATTCTTCAAGCTGTCAATACAATACACGAGGAACGTATAGTGCACTCTGACTTGAAGCCAGCTAACTTCCTTCTTGTCAAAGGTTCCCTAAAACTGATTGATTTTGGTATAGCCAAAGCAATAATGAGTGATACAACAAACATCCAACGGGATTCACAGGTGGGTACCCTGAGTTACATGTCTCCAGAGGCATTTATGTGCAATGAGAGTGATGCAAATGGAAATATCATCAAGTGTGGTCGGCCATCAGATATTTGGTCTTTGGGCTGCATTCTTTATCAAATGGTATATGGTAGAACACCTTTTTCAGACTACAAGACATTCTGGGCCAAATTCAAAGTAATAACAGATCCAAATCATGAAATTACCTATGAACCAGTTTCAAACCCATGGCTTCTGGATCTCATGAAGAAGTGTCTAGCGTGGGACCGCAATGAAAGGTGGAGAATTCCTCAGCTACTCCGACATCCTTTTCTTGTTCCGCCAGCTCCACCTCAGCTCTCCTTGCCTCCAGAACAAAGCTTTAAATTGCTACAATTTATTACTAAAACTTGTCCTGATGACCCAGAAACTTCGCAGCTGTGTTGTCAGCTCCAGCAGGTGCTAGGTGATCCACTCAAGTTAGTAACTCCTCAGTCATTAAGTTCACGAGATCAACAACGTAAACTGTTGTCTCAAATCTCAGAACTTTGCCTCCAACTGCAGGGCCGTTTGACAAATACAGATAAAGAATGA 2544 0.4316 MKCRGDFSMDGKANLPDPPPTVKNLIRPVNPDTTSSSSSSFSSSSPPDFLRHVQAAFKRHRPLGTVQSNIRPRRIMVPQLEVKRSSTLKIDPTVDTKNSQGISLNKGQLEKESLAHRKCTTSIMGEGQEDATITPPPVSGTCKNAFDGGCNAHECHPNVMTNCKDKIIMPPSQVESQNVDGQKKVQFSLGNNTTAQGANDGKAIELENLSSHMGSLALTEMEWAASSQLEESNGFNQDSKNQSILQAESELSLRSDGGLSSQLVKRTTAIQDHLQQFRNFLSQPATQSSVAGPSCATTTSLHASSVPMLNSTTHCSQPHLDCGSHVAAETLRDSNVNSHPVTQGAVKSSNSSLKEMAVAFQASSSAINAGSAFKDADPCKEQQGSMLKETNIPKSTYYHDDKSTMGKESADVTNIQSQAPMSRASSSDVKLESSKLEKPEKAASSKGASAARKRTYDPDLFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCTIYALKKIKLKGRDYATAFGFCQEIEYLNRLKGKNNIIQLIDYEVTDKALLAEVMQGSVSNKDGRVKDDGYIYMVLEYGEIDLAHMLSQKWKELYEYNRTIDENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRDSQVGTLSYMSPEAFMCNESDANGNIIKCGRPSDIWSLGCILYQMVYGRTPFSDYKTFWAKFKVITDPNHEITYEPVSNPWLLDLMKKCLAWDRNERWRIPQLLRHPFLVPPAPPQLSLPPEQSFKLLQFITKTCPDDPETSQLCCQLQQVLGDPLKLVTPQSLSSRDQQRKLLSQISELCLQLQGRLTNTDKE 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0988 847 SMART serkin_6 469 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g0988 847 FunFam serine/threonine-protein kinase mph1 isoform X2 462 549 - -
Bisa05g0988 847 CDD PKc_Mps1 467 762 IPR027084 -
Bisa05g0988 847 Gene3D Transferase(Phosphotransferase) domain 1 582 765 - -
Bisa05g0988 847 MobiDBLite consensus disorder prediction 377 450 - -
Bisa05g0988 847 Gene3D Phosphorylase Kinase; domain 1 462 549 - -
Bisa05g0988 847 Pfam Protein kinase domain 469 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g0988 847 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Bisa05g0988 847 FunFam serine/threonine-protein kinase mph1 isoform X1 583 765 - -
Bisa05g0988 847 ProSiteProfiles Protein kinase domain profile. 469 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g0988 847 MobiDBLite consensus disorder prediction 27 47 - -
Bisa05g0988 847 ProSitePatterns Protein kinases ATP-binding region signature. 475 497 IPR017441 GO:0005524
Bisa05g0988 847 MobiDBLite consensus disorder prediction 1 47 - -
Bisa05g0988 847 MobiDBLite consensus disorder prediction 408 429 - -
Bisa05g0988 847 SUPERFAMILY Protein kinase-like (PK-like) 463 783 IPR011009 -
Bisa05g0988 847 PANTHER MIXED LINEAGE PROTEIN KINASE 131 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0988 Bisa-ChrBisa05 16926797 16935005 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0988 475 763 MAP Kinase Kinase Kinase AT4G08470 31.058 1.49e-27 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Bisa05g0988 Pkinase 1.3e-55 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0988 05 16926797 16935005 Bisa05g0988 05 16926797 16935005 ECH