Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0987 ATGGACGCGAATCCCTTCTTACGTATAGGAGTTACTGAGAGCTGTCCTTCCTGCTACTTCAAGCTCCATCAATGTCCTGTGTACGAGTTTCATGAGGCAGCTTTGTTTTTTCTTACAATGAGCAAACCCAGAACTCATAAGAAACCCAGCAAGCATGAGATTGCTAGCCAAAACCAGAAGCCAGAGAAAACAGAGAAGCAACCCTCTTGGAAAGTGGTAAGAGGATTATTGGTTTGTAGAAATGTCCAGACCCAGCAGCAGCAGAAGCAGCCAGAGCCGATTCCTGAGGCAAAACAACAGAAACCAAAGCAGAAACAAGAACAGAGAAAGCTACAAGAAGAGAGAGTCCCGGAGGATCAAAACGGGAAGAAATGCAAGAAGATGAAGTGTTCAGGGTCGCTTTGTAATAACACGAAGATCATGGCTAGACCTGAAACAGGATGCCCGGATGTCCACAAGAAAAGGGTCTCGTTGGGTGCATGTAGCAGCAACAACAACAACGATGCTTCTAGTAGATCCATGAAAGCTCCTTCTCAGGAACCCAACGGTGCCGTTTCTGCTTCTTCTTCTTCATTGTCAGCATCTTCTACTTCTTCCGTAAGTGGGACGTCTTTCAGGGGAATGCCCTTCAGGAGACTCTCTGGTTGCTATGAGTGTCGTATGGTGGTTGACCCTGTTCTGGGTTTCACCAGAGACCCTTCTCTGCGAGGAAGCATTTTTTCTTGCCCCGACTGTGGTGAGATCTTCATGAAAGCTGAAAACTTGGAGCTTCATCAGGCTGTTAAACACGCAGTGTCTGAACTGGGTCCGGAGGATACGAGCAAGAACATAGTGGAGATCATATTTCATTCAAGCTGGCTAAAGAAGCAATCTCCAGTCTGCAAAATCCACCGCATCCTTAAAGTCCACAACACCCAGAGGACGATTTCCAGATTCGAGGAGTACAGAGACTCCATAAAAGCCAAAGCCACGAAGCTCGCCAAGAAACACCCACGTTGCGTTACAGATGGCAACGAGCTTCTGAGGTTCCACTGCACCACCTTCGTCTGCTCGCTGGGTCTGAACGGATCATCCAACCTCTGCAATTCAATACCACAGTGCAATGCCTGTAGCATAATCAAGAACGGGTTCAAGGTCACCGTAGAAACGAACGGCGGGAAGGGGATATTGACGACGGCGACGAGCGGAAAGGCACACGACAAAGCTGAGGTTTCAGGGGAAGAGAAAAACGACAACAGGGCGATGCTGGTTTGTCGGGTGATAGCTGGCAGGGTGAAGAAGAATGTGGAAGGAGGCATGGAGGAGTATGATTCGGTGGGAGGGGGTGTTGGGGCTTATTCGAATTTGGACAAGTTGTATGTGTTCGATCCAAGAGCGATATTGCCTTGTTTTGTTGTGATCTACAGAGAATTTTGA 1416 0.4809 MDANPFLRIGVTESCPSCYFKLHQCPVYEFHEAALFFLTMSKPRTHKKPSKHEIASQNQKPEKTEKQPSWKVVRGLLVCRNVQTQQQQKQPEPIPEAKQQKPKQKQEQRKLQEERVPEDQNGKKCKKMKCSGSLCNNTKIMARPETGCPDVHKKRVSLGACSSNNNNDASSRSMKAPSQEPNGAVSASSSSLSASSTSSVSGTSFRGMPFRRLSGCYECRMVVDPVLGFTRDPSLRGSIFSCPDCGEIFMKAENLELHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKKQSPVCKIHRILKVHNTQRTISRFEEYRDSIKAKATKLAKKHPRCVTDGNELLRFHCTTFVCSLGLNGSSNLCNSIPQCNACSIIKNGFKVTVETNGGKGILTTATSGKAHDKAEVSGEEKNDNRAMLVCRVIAGRVKKNVEGGMEEYDSVGGGVGAYSNLDKLYVFDPRAILPCFVVIYREF 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0987 471 ProSiteProfiles Zinc finger C2H2 type domain profile. 240 268 IPR013087 -
Bisa05g0987 471 MobiDBLite consensus disorder prediction 50 68 - -
Bisa05g0987 471 ProSitePatterns Zinc finger C2H2 type domain signature. 242 263 IPR013087 -
Bisa05g0987 471 MobiDBLite consensus disorder prediction 159 203 - -
Bisa05g0987 471 SUPERFAMILY ADP-ribosylation 265 470 - -
Bisa05g0987 471 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 127 468 - -
Bisa05g0987 471 Gene3D - 264 470 - -
Bisa05g0987 471 Coils Coil 94 114 - -
Bisa05g0987 471 MobiDBLite consensus disorder prediction 45 68 - -
Bisa05g0987 471 MobiDBLite consensus disorder prediction 83 127 - -
Bisa05g0987 471 MobiDBLite consensus disorder prediction 96 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0987 Bisa-ChrBisa05 16920027 16923477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0987 205 469 C2H2 Transcription Factor Family AT1G75710 52.901 2.51e-98 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa05g0987 None None None