Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0970 ATGGCTGAAATTGAATCTGAACAACCTTATATCTATAGAAATTATCTGCGTCCAGCATCTCAGGCGGTGATGGATGTAATTTGTAGTATGAAGATAACAGAGGAGTACAGAAGAGAGAAAAGCCAGTGTCCGATATGCAAGGAGGAGTTCAAGGTGGGGGAAGAAGCGATCCAACTACCCTGCAAACATTCTTACTGTTCGCATTGCATTCTTCGTTGGCTCAACCTTCGCAATACCTGTCCTGTTTGTCGCCGTCACTTGTATTCTTTCCTTTCCATGTCCTCACCGCCCAAAATCGCACCGCTTACTTCCAGTTTCAGACGATCTCCACCTGTCCATTATGGATGGGATCATTTTTTTCCTCCGTTTGTTCACTCTATTCCATACGATCTTACTGAATTACAAATTGTCGATGAACATTCATTGCCATCTTCCCCTTCTGTGGACAACGGTGAATCTGTTTATGACACCACTGACACTGCAGGTTGGGCCGGGTCTGAACAAGCTGATTGA 513 0.4464 MAEIESEQPYIYRNYLRPASQAVMDVICSMKITEEYRREKSQCPICKEEFKVGEEAIQLPCKHSYCSHCILRWLNLRNTCPVCRRHLYSFLSMSSPPKIAPLTSSFRRSPPVHYGWDHFFPPFVHSIPYDLTELQIVDEHSLPSSPSVDNGESVYDTTDTAGWAGSEQAD 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0970 170 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 10 89 IPR013083 -
Bisa05g0970 170 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 37 87 IPR033276 GO:0004842|GO:0016567|GO:0046621
Bisa05g0970 170 Pfam Ring finger domain 42 84 IPR001841 -
Bisa05g0970 170 SMART ring_2 43 83 IPR001841 -
Bisa05g0970 170 MobiDBLite consensus disorder prediction 142 170 - -
Bisa05g0970 170 ProSiteProfiles Zinc finger RING-type profile. 43 84 IPR001841 -
Bisa05g0970 170 SUPERFAMILY RING/U-box 27 93 - -
Bisa05g0970 170 ProSitePatterns Zinc finger RING-type signature. 61 70 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0970 Bisa-ChrBisa05 16650306 16650818 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0970 18 84 C3H Transcription Factor Family AT1G68180 50.746 3.55e-18 77.0