Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0966 ATGGTGAAGACAGAACACAAGATCCAGGCAGATGCATCGAAGAAGAAGAAGTACAAGGGGGTGAGAATGAGAAGCTGGGGGTCATGGGTTTCAGAGATTAGAGCTCCAAGCCAGAAAACAAGAATATGGCTTGGCTCTTATTCAACCCCTGAGGCTGCAGCCAGAGCCTATGATGCTGCACTTCTCTGCCTCAAAGGCTCTTCTGCTAATCTCAATTTCCCTTCTTCTTCCTCCTCACATTTTATCCCTCAAGACACAGCCATGTCTCCCAAATCCATTCAACGAGTTGCTGCAGCAGCTGCTAACAGTTTTGCTGAAAATGTCACTACCCCATCTTTTCCTCCTCCTTCAACCTCTTCTTCATCAATGGCTTCCTCTCCCTCTGATCAAATCGATGATGATGCTTCACTAGTCTCATCCTTTCACCCCTTCTCTACCTATGATCATCAAACTGCTATGATGGAATCTTGGTGCAACTTTGATGGGTTTAATTCCCCAAAATATGCTGATCATCTGCTCAGTGGGGGTGGCTTGTTTGACATTGATTCACACCAGCTGCTCGATGGTATGTATGAAGAAAGTGACATTCGTTTGTGGAGCTTCTGCTGA 609 0.4581 MVKTEHKIQADASKKKKYKGVRMRSWGSWVSEIRAPSQKTRIWLGSYSTPEAAARAYDAALLCLKGSSANLNFPSSSSSHFIPQDTAMSPKSIQRVAAAAANSFAENVTTPSFPPPSTSSSSMASSPSDQIDDDASLVSSFHPFSTYDHQTAMMESWCNFDGFNSPKYADHLLSGGGLFDIDSHQLLDGMYEESDIRLWSFC 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0966 202 PRINTS Ethylene responsive element binding protein signature 18 29 IPR001471 GO:0003700|GO:0006355
Bisa05g0966 202 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
Bisa05g0966 202 SMART rav1_2 17 80 IPR001471 GO:0003700|GO:0006355
Bisa05g0966 202 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 12 140 - -
Bisa05g0966 202 Gene3D AP2/ERF domain 16 75 IPR036955 GO:0003700|GO:0006355
Bisa05g0966 202 FunFam ethylene-responsive transcription factor ERF014-like 16 76 - -
Bisa05g0966 202 Pfam AP2 domain 17 66 IPR001471 GO:0003700|GO:0006355
Bisa05g0966 202 MobiDBLite consensus disorder prediction 107 131 - -
Bisa05g0966 202 SUPERFAMILY DNA-binding domain 17 75 IPR016177 GO:0003677
Bisa05g0966 202 CDD AP2 16 76 IPR001471 GO:0003700|GO:0006355
Bisa05g0966 202 ProSiteProfiles AP2/ERF domain profile. 17 74 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0966 Bisa-ChrBisa05 16622825 16623433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0966 1 201 AP2-EREBP Transcription Factor Family AT1G21910 46.154 3.02e-52 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa05g0966 AP2 4.7e-12 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0966 05 16622825 16623433 Bisa05g0966 05 16622825 16623433 ECH