Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0965 ATGGGGCAAGTTACCCAACTCCCCTGCGACTGTGACGGCGTCTGTATGGCCTGCAAGGTGAAGCCGGTGGAGGAAGAGTGTCTGCAGTGTAAAACATGCGTCACACAGTGGCACGTCGGCTGTCTCTCCTCCCCTCCAGCGACGATGGCCGAGACCGCTCAGTGGGAGTGCCCTGACTGCTCCACTCCCCCCTCCGACGTTACTCCGGTGACCGTCGCCAAGGCCTTGCTCGACGGAGCTGGCGATGGGTCTGGCGATTTGATGGCTGCGATTCGAGCGATTGAGGCGGATACCTCACTGACGGAGACGGAGAAGGCCAAGAAACGTCAACGGCTCATGAGCGGAAAGGCTGCGTTGGAAGAGGACGAGGACGAAGCAAAGAAGAAGGGAGAAGGGGAAGGGAAGGACGCGTTGGATATTCTCAGTGTGACTCTGAACTGCTCTTTCTGCATGCAGCTTCCGGAGCGGCCTGTGACAACTCCATGTGGCCACAACTTCTGCCTAAAATGCTTTCAGAAGTGGATTGGACAAGGGAAAAATACATGTGCAAAGTGTCGTTCTACTATCCCTTCCAAAATGGCAAGCCAGCCACGTATCAATTCTGCACTTGTAATTGCCATTCGTATGGCAAAAGTATCCAAGAACAATGCCCCTGGTGAAACTTCTAGAGTTTACCAGTTTGTACATAACCAAGATAGACCAGACAAGGCATACACTACAGAGCGAGCCATAAGGAAAGGCAAAGCAAATGCAGCAAGTGGAAAGATTTTTGTAACTGTGCCTCAGGATCATTTTGGTCCAATCCCAGCTGAAAATGATCCAGTGCGAAATCAGGGCGTTCTGGTTGGCGAATGTTGGGAAGATAGGCTGGAATGCCGGCAATGGGGCGTTCACTTTCCACACGTTAGTGGTATAGCTGGACAGTCAAATCACGGTGCTCAATCAGTAGTCCTCTCGGGTGGTTATATTGATGATGAGGATCATGGAGAATGGTTTCTTTACACAGGAAGTGGGGGTAGAGACTTGAGTGGGAATAGGAGAACAAACAATACTCAATCTTTTGATCAGAAGTTTGAGAAATCCAACTTGGCTCTCAAAGTAAGCTGCCTCAAGGGCTATCCTGTTAGAGTTGTGAGATCTCACAAGGAGAAGCGTTCCTCATATGCCCCTGAGAAAGGATTACGTTATGATGGTGTTTATAGAATTGAAAAGTGTTGGCAGAAACAGGGATTGCAGGGTTTCAAGGTTTGCCGCTATTTGTTCGTTAGATGTGATAATGAACCTGCCCCTTGGACAAGTGATGATCATGGTGATCGCCCCAGACCCTTGCCAGTAATCTCTGAGTTGAAAAAAGCTGTAGCTTTATCTGAGAGGAAGGAGAGTCCAGCTTGGGATTTTGATGAGAAAGATTCTTGTTGGAAGTGGAAGAAACCACAACCTGCCAGCCAAAGACAGGTAAAAAGTATGGATCCCAAGGAGATCGAAAGGTCAAGGAGAGAAATAAGGAGATCCCAGAAAATGTCAATCAAGGAAAGATTGCTGAGAGGATTCAGTTGCCATACCTGCAAGCAGGTTATGGTTTCTCCCGTAACTACACCTTGTGCACATAACTTCTGTAAGACATGTCTGGAAGGTGCGTTTGCGGGTCAGACTTTTGTAAGGGACAGAAACAAAGGTGGAAGATCCCTTCGGTCCCAGAAAAATGTAATGAAATGTCCTGCATGCCCCATCGACATTTCTGAATTTCTGCAGAACATTCAGGTTAATAGAGAATTAATGGGTGTCATTGAGTCCTTGAAAGCTGAGGCCGAAGCTGAAGAAAATGAAGCGGAAGAATTTAGTGAGGGCGGTGATGGGGCAGAGGATGAAGAATTTGGCTCGGATGAAGGCAAGCGGCATGAGCCTGAGGAAAAGAATGATGATGATAAGGAAAACCCAGTTGAGAAGCCTAATGATTCATCTGGAGAATCTGATGTCAAAGAGGTTCAGAATGGAGAAGTTCTAGTGGCCAATGAGGTGCCAAATCCTGCAGCGAAGCGCAATACCAAAAGAAAGAAAACTAATGCTGAAGAACTTGCCCCTAAAAGACGAAGAGGCAGAAAGACTGAAGATGAAGCAGTGGACGAAGGAGATGATTCTCCATCAAGTCCTCTGAGCATGACTGAGTGA 2169 0.4781 MGQVTQLPCDCDGVCMACKVKPVEEECLQCKTCVTQWHVGCLSSPPATMAETAQWECPDCSTPPSDVTPVTVAKALLDGAGDGSGDLMAAIRAIEADTSLTETEKAKKRQRLMSGKAALEEDEDEAKKKGEGEGKDALDILSVTLNCSFCMQLPERPVTTPCGHNFCLKCFQKWIGQGKNTCAKCRSTIPSKMASQPRINSALVIAIRMAKVSKNNAPGETSRVYQFVHNQDRPDKAYTTERAIRKGKANAASGKIFVTVPQDHFGPIPAENDPVRNQGVLVGECWEDRLECRQWGVHFPHVSGIAGQSNHGAQSVVLSGGYIDDEDHGEWFLYTGSGGRDLSGNRRTNNTQSFDQKFEKSNLALKVSCLKGYPVRVVRSHKEKRSSYAPEKGLRYDGVYRIEKCWQKQGLQGFKVCRYLFVRCDNEPAPWTSDDHGDRPRPLPVISELKKAVALSERKESPAWDFDEKDSCWKWKKPQPASQRQVKSMDPKEIERSRREIRRSQKMSIKERLLRGFSCHTCKQVMVSPVTTPCAHNFCKTCLEGAFAGQTFVRDRNKGGRSLRSQKNVMKCPACPIDISEFLQNIQVNRELMGVIESLKAEAEAEENEAEEFSEGGDGAEDEEFGSDEGKRHEPEEKNDDDKENPVEKPNDSSGESDVKEVQNGEVLVANEVPNPAAKRNTKRKKTNAEELAPKRRRGRKTEDEAVDEGDDSPSSPLSMTE 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0965 722 Coils Coil 109 129 - -
Bisa05g0965 722 FunFam E3 ubiquitin-protein ligase ORTHRUS 2 246 441 - -
Bisa05g0965 722 SMART PHD_3 14 61 IPR001965 -
Bisa05g0965 722 SUPERFAMILY RING/U-box 513 601 - -
Bisa05g0965 722 MobiDBLite consensus disorder prediction 105 133 - -
Bisa05g0965 722 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 498 618 IPR013083 -
Bisa05g0965 722 SUPERFAMILY PUA domain-like 249 444 IPR015947 -
Bisa05g0965 722 SUPERFAMILY RING/U-box 144 193 - -
Bisa05g0965 722 Coils Coil 589 616 - -
Bisa05g0965 722 CDD RING-HC_ORTHRUS_rpt1 145 190 IPR047498 -
Bisa05g0965 722 ProSiteProfiles Zinc finger RING-type profile. 147 186 IPR001841 -
Bisa05g0965 722 MobiDBLite consensus disorder prediction 602 722 - -
Bisa05g0965 722 Gene3D - 246 444 IPR036987 -
Bisa05g0965 722 Pfam SAD/SRA domain 277 426 IPR003105 -
Bisa05g0965 722 SUPERFAMILY FYVE/PHD zinc finger 7 67 IPR011011 -
Bisa05g0965 722 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 3 612 IPR045134 -
Bisa05g0965 722 ProSiteProfiles Zinc finger RING-type profile. 519 575 IPR001841 -
Bisa05g0965 722 FunFam E3 ubiquitin-protein ligase ORTHRUS 2 93 214 - -
Bisa05g0965 722 MobiDBLite consensus disorder prediction 683 707 - -
Bisa05g0965 722 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 13 62 IPR013083 -
Bisa05g0965 722 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 93 213 IPR013083 -
Bisa05g0965 722 ProSiteProfiles YDG domain profile. 275 423 IPR003105 -
Bisa05g0965 722 SMART ring_2 147 185 IPR001841 -
Bisa05g0965 722 SMART ring_2 519 575 IPR001841 -
Bisa05g0965 722 ProSitePatterns Zinc finger RING-type signature. 534 543 IPR017907 -
Bisa05g0965 722 MobiDBLite consensus disorder prediction 604 624 - -
Bisa05g0965 722 ProSitePatterns Zinc finger PHD-type signature. 9 60 IPR019786 -
Bisa05g0965 722 MobiDBLite consensus disorder prediction 625 656 - -
Bisa05g0965 722 Pfam RING-type zinc-finger 519 573 IPR027370 -
Bisa05g0965 722 Pfam Zinc finger, C3HC4 type (RING finger) 147 185 IPR018957 GO:0046872
Bisa05g0965 722 SMART G9a_1 270 427 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0965 Bisa-ChrBisa05 16599751 16604160 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0965 1 606 C2H2 Transcription Factor Family AT5G39550 61.639 0.0 755