Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0943 ATGGCGGATTCAAGGGTGGAGACCATTTCAAGATTAGCCCAATGGAAAATTGACAACTTCGGACCTTGCTCCTACAAAAAATCCGACCCCTTCAAGGTCGGAATCTGGAACTGGTACTTATCAATAGAGAGGAATAGGTACCTCTATATACATCTATTTCCAGAGCCTTCACGGGTTTCTAAGGAACAACCACCAATTGCTCGATTTATACTCCGGGTGTCTAATACCGGCTCTTCCCGCAGATTTTACATTTCTCCTGTTCATGAAAGAATTCTTAGGACATGTGATGACTTCGTCTGGCCTGTTGATACAACATTTGTTGGTCGCTTCATTATCGACGTTGAATTTCTTGACTTGAAGATTTGTCCTCTGAATGGTGGAGAAGCCTGTTCTGTGTGGCCATGTGATGGAAAATTGCAATCTGTTGCTACCCAAGGCACTCTCCGATGCCTCTCTCGCATGCTTGACGAGGGTATACATGCTGATCTCACCATTAACACTGCAGATGGTACATTGAGAGCTCACAAGGCAGTTTTATCTGCAAGTTCTCCTGTGTTTCAGAGCATGTTTCATCACAACCTGAAGGAGAAAGAGTCATCTACAATCCACATAGAAGACATGTCACTAGAATCTTGCATGGCCCTTCTAAGTTACTTGTATGGCACAATAAAACAGGAAGATTTCTGGAAGCACCGGATTGCGTTGCTTGGAGCAGCCAATAAATATGACATTACTGGTCTTAAGGATACCTGCGAGGAAAGCCTATTGGAAGATCTTAATTCGGGAAATGTCCTTGAGAGGCTGAACGAGGCTTGGCTTTATCAATTGCACAAGTTAAAGAAAGGATGCTTAACGTTCTTATTTGATTTTGGTAAGATATATGACGTAAGAGAAGAAATACATAACTTTTTCAGGCACGCAGATAGGGAACTGATGATTGAGATGTTTCAGGAGGTGCTTACAATTTGGAAACCACTATAG 981 0.4241 MADSRVETISRLAQWKIDNFGPCSYKKSDPFKVGIWNWYLSIERNRYLYIHLFPEPSRVSKEQPPIARFILRVSNTGSSRRFYISPVHERILRTCDDFVWPVDTTFVGRFIIDVEFLDLKICPLNGGEACSVWPCDGKLQSVATQGTLRCLSRMLDEGIHADLTINTADGTLRAHKAVLSASSPVFQSMFHHNLKEKESSTIHIEDMSLESCMALLSYLYGTIKQEDFWKHRIALLGAANKYDITGLKDTCEESLLEDLNSGNVLERLNEAWLYQLHKLKKGCLTFLFDFGKIYDVREEIHNFFRHADRELMIEMFQEVLTIWKPL 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0943 326 ProSiteProfiles BTB domain profile. 161 220 IPR000210 GO:0005515
Bisa05g0943 326 Pfam BTB/POZ domain 153 257 IPR000210 GO:0005515
Bisa05g0943 326 SMART BTB_4 161 259 IPR000210 GO:0005515
Bisa05g0943 326 SUPERFAMILY POZ domain 145 257 IPR011333 -
Bisa05g0943 326 CDD BTB_POZ_ZBTB_KLHL-like 160 242 - -
Bisa05g0943 326 PANTHER OS08G0495500 PROTEIN-RELATED 1 325 IPR044714 -
Bisa05g0943 326 CDD MATH 15 101 IPR002083 GO:0005515
Bisa05g0943 326 SUPERFAMILY TRAF domain-like 12 90 - -
Bisa05g0943 326 Gene3D Potassium Channel Kv1.1; Chain A 137 288 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0943 Bisa-ChrBisa05 16268178 16269918 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Bisa05g0943 BTB 5.2e-23 CL0033