Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0934 ATGAGTGCACTCTGTCACTATCGTGTTTTAGATGAACATGTATATGGTGAAATCTTTCAAGCTCCCGAAACATTCGAATCTTCAAACACAGAGAGTTTCAATGTTTGGTTTTGTGTTTGTTTTGCTTTCCGTTTGGACTCTCAATTGTTCGTCATGGATGATATGCCTGCCATTCACACTTTCCAATCTATATCATGTGAACAATTCTTTCAAGCGGGTCCAGCTTTCTTGCTAAGGAATCTATCCCACCCAATGATTCACCCTGATTCTCTTGAGGAAATGATAACTAGTATAATGTCTGATGCTCAATATTTCTACGACAATCATCATTGCTCCTATGATGGGCATCACTCTTCTGCTATGTACCCTTTGACTGTAGACATTATCGTTGAACTAGAAGAAACAGATGAAGCTCTTGCATGGGTCTTATGGGAATCTATAGAAGATCAAGAGACATTAATGGTTCCTACTTCTGAGGAAGCTATCATGTCCTTAAACACAATGAAAGTTGAAGATAATGTTGGTGCTGATGCAGATCGTTGTTGTATTTGTCTTGAAGAGTACGACGAAGGAGTTGAGATTTTGGCATTGCCATGTCACCATATCTATCATAGTGATTGTATTGTTCAGTGGCTTAAAACCAGTCACTTATGTCCCTTATGTCGACACGAGATGCCTGTATTATCTAATGACGACAACGACTTTTAA 708 0.3884 MSALCHYRVLDEHVYGEIFQAPETFESSNTESFNVWFCVCFAFRLDSQLFVMDDMPAIHTFQSISCEQFFQAGPAFLLRNLSHPMIHPDSLEEMITSIMSDAQYFYDNHHCSYDGHHSSAMYPLTVDIIVELEETDEALAWVLWESIEDQETLMVPTSEEAIMSLNTMKVEDNVGADADRCCICLEEYDEGVEILALPCHHIYHSDCIVQWLKTSHLCPLCRHEMPVLSNDDNDF 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0934 235 CDD RING-H2_PA-TM-RING 181 222 - -
Bisa05g0934 235 SUPERFAMILY RING/U-box 161 228 - -
Bisa05g0934 235 SMART ring_2 181 221 IPR001841 -
Bisa05g0934 235 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 104 226 - -
Bisa05g0934 235 Pfam Ring finger domain 180 222 IPR001841 -
Bisa05g0934 235 ProSiteProfiles Zinc finger RING-type profile. 181 222 IPR001841 -
Bisa05g0934 235 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 144 228 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0934 Bisa-ChrBisa05 16052703 16053410 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0934 146 226 C3H Transcription Factor Family AT1G18760 30.864 1.37e-15 71.6