Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0932 ATGGCACTAAATACATTTTATCGATGTCGAGTTTCTGATGAATTACCTGCTTATGAAATCTTTCAAAACTTCCAAGCCTTTGAACCTTTGAATACTGAGAGTTTTAATATTTACTTTTGTGTTCGGTTTGCCTTCCATTTTGACCCAAGTTTGTACTTTATGGAAAATATGCGTGAGATTCACACTTTCCAATCTATTTCATGTGAACAATTCTTTCAGGAGGGTCCAACTTTCTTGCTAAGGAATCTATCGCACCCAATGATCTACCCCGATTCTCTTAATCAGTTGATACCTACTATATTGTCTTATACTCAACATTTTTACGATGAGCATCATCGATCTTGGATTGGGGTCCATTCTGCTGCTACATACTCTTTGACTGTGGAAATTATTGTTGAATTAGAAGAAACAGAGGAAGATCTTGAAATGGCTTTATGGGAATCTATGGAAGATCAAGGGACATTAATGGTTCCTGCATCTGAGGAAGCTATCATGTCCTTGAACACAATGAAAGTTGAAGACAAAATTGGTGTTGGTGCTGGCCATTGTTGTATTTGCCTTGAAGAGTATGATAAAGGAGTTGAAATTTCAACATTGCCTTGTCACCATATTTATCATAGTATTTGTATTGTTCAGTGGCTTAAAACAAGTCACTTATGTCCCTTATGTCGATATGAGATGCCTATACTATCTAATAATAATAACACTTTTTAG 714 0.3571 MALNTFYRCRVSDELPAYEIFQNFQAFEPLNTESFNIYFCVRFAFHFDPSLYFMENMREIHTFQSISCEQFFQEGPTFLLRNLSHPMIYPDSLNQLIPTILSYTQHFYDEHHRSWIGVHSAATYSLTVEIIVELEETEEDLEMALWESMEDQGTLMVPASEEAIMSLNTMKVEDKIGVGAGHCCICLEEYDKGVEISTLPCHHIYHSICIVQWLKTSHLCPLCRYEMPILSNNNNTF 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0932 237 Pfam Ring finger domain 182 224 IPR001841 -
Bisa05g0932 237 SUPERFAMILY RING/U-box 164 230 - -
Bisa05g0932 237 CDD RING-H2_PA-TM-RING 182 224 - -
Bisa05g0932 237 SMART ring_2 183 223 IPR001841 -
Bisa05g0932 237 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 94 228 - -
Bisa05g0932 237 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 146 230 IPR013083 -
Bisa05g0932 237 ProSiteProfiles Zinc finger RING-type profile. 183 224 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0932 Bisa-ChrBisa05 16033599 16034312 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0932 139 228 C3H Transcription Factor Family AT1G18760 35.165 6.25e-16 72.4