Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0931 ATGAGTACACTTTGTCACTATCGTGTTTTAGATGAACATGTATATGTTGAGATCTTTCAAGCCCCCGAAACATTCGAATCTTCAAACACAGAGAGTTTCAATGTTTGGTTTTGTGTTTGTTTTGCTTTCCGTTTCAACTCTCAATTGTTCGTCATGGATGATATGCTTGCAATTCACACTTTCCATTCTATATCATGGGAACAATTCTTTCAAGCAGGTCCAGCTTTCTTGCTAAGGAATCTATCCCACCCAATGATTCACCCTGATTCTCTTGAGGAAATGATAACTAGTATGATGTCTGATGCTCAATATTTCTACGATAAGCATCATTGCTCTTATGATGGGCATCACTCTTCTGCTATATACCCTTTGACTGTAGACATTATCGTTGAACTAGAAGAAACAAATGAAGCTCTTGCATGGGTCTTATGGGAATCTATGGAAGATCAGGAGACATTAATGATTCCTACTTCTGAAGAGGCTATCATGTCCTTGAACACAATGAAAGTTGAAGATAATATTAGTGCTGATGCAGACCTTTGTTGTATTTGTCTTGAACAATGCGACGAGGGAGTTGAGATTTTGGCATTGCCATGTCACTATATCTATCATAGTGATTGTATTGTTCAGTGGCTAAAAACCAGTCACTTATGTCTCTTATGTCGATATGAGATGCCTGTACTATCTAATGATGACAATGACTTTCAAAAATTATTACCTTTTGTTTAG 729 0.3704 MSTLCHYRVLDEHVYVEIFQAPETFESSNTESFNVWFCVCFAFRFNSQLFVMDDMLAIHTFHSISWEQFFQAGPAFLLRNLSHPMIHPDSLEEMITSMMSDAQYFYDKHHCSYDGHHSSAIYPLTVDIIVELEETNEALAWVLWESMEDQETLMIPTSEEAIMSLNTMKVEDNISADADLCCICLEQCDEGVEILALPCHYIYHSDCIVQWLKTSHLCLLCRYEMPVLSNDDNDFQKLLPFV 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0931 242 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 104 226 - -
Bisa05g0931 242 Pfam Ring finger domain 180 222 IPR001841 -
Bisa05g0931 242 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 144 228 IPR013083 -
Bisa05g0931 242 ProSiteProfiles Zinc finger RING-type profile. 181 222 IPR001841 -
Bisa05g0931 242 SUPERFAMILY RING/U-box 161 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0931 Bisa-ChrBisa05 16021263 16021991 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0931 146 226 C3H Transcription Factor Family AT1G18760 25.926 5.32e-12 61.6