Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0924 ATGTCAAAGTCTCCCTCTCCTGAATCGCAACAGTCCATTTATTGTTCTTCTCGGACTAGGGAAACTAATGAGGCACCAGAAATGGACGATCCAGAATCTACAATTGCTACAGTTGCTAATTTTGTTGAGCAACTGCATGCCAACATGTCCTCATCACATGAGAAGGAACTTATCACAGCACGATTGTTAGGTATTGCTAGGGCAAGAAAGAATGCTAGAACTCTTATTGGTTCTCATGCTCAAGCAATGCCATTGTTCATAAGCATTCTCAGAAATGGAACCCCTCTGGCGAAAGTTCATGTTGCTGCCACTCTGAGTGTCCTATGCAAAGATGAAGATTTGAGGTTAAAAGTACTTCTTGGTGGATGTATCCCACCGTTACTGTCACTTTTAAAATCTGAATTAACAGAGGCGAGGAAGGCCGCAGCTGAAGCAATATATGAAGTTTCCTCTGGTGGTCTTTCAGATGTTCACGTTGGTATGAAGATTTTTGTTACAGAAGGTGTGGTTCAAACCTTATGGGATCAACTGAATCCAAAGAACAAACAAGACAAAGTTGTGGAGGGTTTTATTACTGGGGCATTAAGAAATCTGTGTGGTGGCAAAGATGGCTACTGGAAAGCAACATTAGAAGCTGGAGGTGTGGATATTATTGTGGGTCTCTTGTCTTCAGACAATGCTGTTGCTCAGTCAAATGCGGCTTCTCTATTGGCACAACTGATTGTAGCTTTCAGTGATAGCATTCCCAAAGTAATAGAGTCTGGAGCAGTCAAAGCTTTACTTTGTCTTGTTGGTCGGGAAAATGATATTTCCGTGCGTGCAAGTGCTGCTAATGCTCTAGAGGCCCTTTCTTCAAAGTCAACTGGAGCTAAGAAAACCATTGTCAGTGCAGATGGTGTTTCAATCCTCATTGGGGCTATAGTTGCTCCGTCTAAAGAGTTTATGCAAGGAAATGGCCAGGCTCTGCAGGAACATGCAACTCGAGCTTTGGCAAATATTCATGGTGGCATGTCTGCTTTAGTACTATATCTTGGAGAACTTTCCCATTCTCCTCGCCTTCCTGCACCAGTTGGTGATATAATTGGGGCTCTTGCTTATACACTGATGGTCTTTGAGGAAAAAGATGTTGATGAACAACCTTTTGATGCAACTCAAATAGAGGATATTCTAGTGACTCTGTTAAAGCCTCGAGACCACAAGATATTTCGAGAGCGTGTACTAGAGGCCATGGCTAGTCTATATGGAAATATTTGTCTCTCGAAGAGGCTTGATCATGCATATGCAAAGAAGTTTCTTATCGGACTTATAACTATGGCGGCTGCTGATGTGCAAGAGCATCTAATACTCTCCTTGAAAAGCTTGTGCTGTGATATGGTAGGAATATGGGAGGCCATAAACAAAAGAGAAGGTATCCAGTTACTTATGTCCATGCTGGGACTATCCAGTGAGCAGCATCAAGAGTATGCAGTTCAGTTGCTGGCAATTTTAACTGACCAGGTTGATGACAGCAAGTGGGCAATCACTGCTGCTGGAGGGATTCCTCCATTGGTGGAGTTGCTAGAGACAGGATCACAGAAGGCAAGAGAGGAAGCTGCTCATGTTCTATGGAATTTGTGCTGTCACAGTGAAGATATCCGGGCATGTGTTGAAAGTGCAGGGGCCATCCCAGCGTTCATATGGCTTCTGAAGAGTGGTGGATCAAGAGGACAAGAAGCTTCTGCCATGGCAATGACTAAGCTTGTGAGAATAGCTGACTCTGCTACTATTAATCAGTTAATAGCGTTGCTTCTAGGGGACTCTCCAAGCTCAAAGGCCCATATTATTCAAGTTTTAGGTCATGTACTTACTGTGGCTTCACAGAAGGACCTCCTGCTAAAAGGCTCTGCAGCTAATAAGGGGTTGAGATCTCTAGTTCAGGTTCTCAATTCATCAAATGAGGAAACCCAGGAATATGCAGCTTCTGTGTTAGCTGATTTATTCAGCACAAGACAAGACATTTGTGATAGTTTTGTAGTAGATGAGATTGTGCTTCCTTGCTTGAAGCTTTTGACAAGCAAAAACCAAGTTGTTGCAACTCAGTCAGCTCGAGCATTGAGTGCTTTGTCTCGTCCAAACAAGGGTAGATCTGCAAATAAGATGCCTTATATTGCAGAGGAGGATGTCAGGCCACTAATTGAGTTGGCTAAAGCTTCCTCTATTGATGCTGCTGAAACTGCAGTTGCTGCACTGGCCAATCTTATCTTTGATCCCTTTATTGCTGCTGAAGCTCTGGCAGGAGATGTTGTTTTATCTTTAAATAGAGTTCTGGCAGAAGGAACTTTGGAAGGTAAACAAAATGCATCATGTGCCCTTCATCAGTTACTGAAGCATTTTCCTGTAGATGATGTTCTCAAGGGGAATGCTCAGTACCGTTCCACTGTTCTTGCACTTGTTGATTCGATAAATGCAATGAATATGGATGGAGCTGATGCTGCAGATGCTTTAGAAGTAGTTGCGCTGCTAGCCAGAACAAAAAGGGGTGTTAGTTTCACTTATCCTCCTTGGTCTGTACTTGCTGAAATACCATCAAACTTAGAACCTCTTGTATGCTGCCTGTCTGAGGGGCCTCCCCTAGTACAAGACAAGGCAATTGAAATTCTGTCTAGACTTTGTGGAGATCAATTAGTTGTTCTTGGGAATTTCTTGGCTGCTAGGTCTAGATCCTTTAGTTCATTAGCTGATAGAATAATGAACTCCTCCAGTTCAGAAGTTAAAGTTGGAGGGGCTGTTTTACTTTTTTGTGTTGCAAAGGAGCATAAAGAGCTGTCAATGAATGCACTTGATAATTCTGGGTATCTAAAATCTTTAATATATTCTTTAGTTGATATGATGAAGCAGAACTTTAGCTGCTCATTGGCAATTGGAGTACGAACTTCCAGAGATTTCATGGAGAGAAGTTTATTTCAGAAAGTTGATCAAATTGATATTCCTTACCAGGCTAAAGTGTTGGGTGTCACTGTTGCCTTGTGGTTGCTCTCAATTATTGCTTCTTTCCATATAAAGAACAAACTCTCAATTATGGAAGCTGGTGGACTTGAGGCTCTCTCCAACAAGCTTGCAAGCCATACTTCCAATTCACAGACAGAATTTGGGGATACAGGAGTTTGGATCAGTGCCTTGCTTCTGGCCATTTTGTTTCAAGATGAAAATGTGGTTCTATCTCCTGCAACAATGCACATTATACCTTCTCTTACTCATCTGCTACGGTCTGGTGAAGTGACAGATAAATATTTTGCTGCCCAGGCTATGGCTAGTCTTGTTTGTATTGGTAATAAGGGAATAAACCTTGCTGTTGCAAACTCAGGTGCTGTTGCTGGATTGATAAGTATAATTGGTAATATAGAGTCAGATATGCTAAACCTTGTTGCTTTATTGGATGAATTTTCATTGGTGCGAAACCCTGATCAAGTTGTTTTAGATCAGCTTTTTGAAATCGAAGATGTAAGAATGGGCTCTGTTGCACGGAAATCTATACCTCACTTGGTGGATCTCTTGAGACCAATACCAGAAAGGCCTAGTGCCCCACCAGTTGCTGTCAAACTCTTGACACGCATCGCAGAGGGAAGTGATACAAACAAATTAATCATGGCCGAAGCAGGCGCTTTGGAAGCTCTGACAACGTACCTGTCTTTGAGCCCTCAAGACTCAACTGAGGCCATTATTTCTGAATTATTAAGAATATTATTTTGTAATTCTGACCTTATTAAACATGAAGCATCAACAAGTTCCCTGAACCAACTCATTGCCGTTTTGCGTCTTGGATCTAGAAATGCTAGATATAGTGCAGCAAGAGCACTTCATGAACTTTTTGATGCTGAGAACATTAGAGACTCAGAATTAGCTAAACAGGCCATTCGACCATTGGTTGACATGCTTAATACAACATCAGGTAGCGAGCAGGAGGCCGCCCTTATTGCATTGATAAAATTAACATCAGGAAATTCTTCAAAAGCATCTCTTTTTACCGATGTGGAAGGAAGCCCACTTCAGAGCTTATACCAGATATTGTCGTCTGCTTCATCATTGGAACTAAAGAGCAATGCTGCACAAATTTGCTCTGTTCTTTTTTGTAACAGGAAGTTCAGAGCTGATCCTCTTGCCCTGGAATGCATAGAACCCCTTATATCACTGATGCAGTCTGATTCTGGCACAGCAATAGAATATGGGGTTTGTGCTTTTGAGAGGTTGTTGGAAGATGAATATGTGGAGCTTGCAGCTGCCTATAATGTTGTGGATCTCCTTGTCAGTTTGGTTGCAGGATCAAACTATCAGCTCATTGAGGCAACTGTATCTGCTCTCATCAAGTTGGGCAAAGACAGGACTCCATGCAAACTAGAGATGGTCAAAGCTGGCATTTTTGATAATTGCCTTAAGTTACTCGAACTAGCACCTAGCTCATTATGCTCCACCATTGCCGAACTGTTCCGCATTTTAACAAATAGTAATGCAATTGCAAGAAGTTCTGCTTCAGCAGAAATTGTAGAGCCCCTTTTTCATGTTTTGCTCCGTCGAGATTTTGATTTGTGGGGACAGCATAGCGCCTTACAAGCACTTGTAAATATATTGGAGAAGCCCCAAAGTCTTGCAACCTTAAAACTAACACCTAGTCAAGTTATTGAGCCCTTGATATCGTTCCTGGAATCCCCATCCCAAGCTATTCAGCAGCTTGGCACAGAATTGCTGTCTCATCTTCTTGCCCAAGAACATTATCAGCAAGATATTACAACAAAGAACGCAGTTGTTCCCCTTGTACAACTTGCAGGAATTGGAATACTGAACTTGCAGCAAACAGCAATAAAAGCATTGGAGAAAATCTCCACAAGCTGGCCAAAGGCAGTTGCTGATGCAGGAGGCCTTTTTGAGCTTGCAAAGGTTATTATTCAAGAAGATCCTCAGCCACCGCATGCTCTCTGGGAATCAGCTGCTTTGGTTCTTTCGAATGTATTATGTTCCAATGCTGATTATTATTTTAAAGTCCCTGTGGTGGTTCTTGTTAAACTGTTGCATTCAACAAATGAGAGTACAATTATGGTAGCTCTTAATGGCCTAATAGTTCATGAAAGAAGTGATGCTTCAAGTGCTGAACAAATGATGGAAGCTGAAGCTATAGATGCTCTGTTACATCTTTTAAGATCTCATCAATGTGAAGAAGCATCTGGCAGATTACTTGAAGCTTTATTTAACAATGTTAAAATACGAGAGATGAAAGCATCTAAGTATGCAATAGCACCTTTATCTCAGTATCTATTGGATCCCCAGACCAGATCACAGTCTGGCAAGCTTCTTGCTGCTCTAGCTCTAGGAGATCTTTCCCAGCATGAGGGACATGCTAGATCCCGTGATTCTGTTTCTGCATGCCGTGCGTTGATAAGTTTACTTGAAGATCAGCCAACTGAAGAAATGATGATGGTTGCTATTTGTGCATTGCAAAACTTTGTTATGAACAGCAGGACTAATAGGCGAGCTGTTGCAGAGGCTGGTGGCATATTAGTGATTCAGGAATTGCTACTATCTCCAAATCCAGAAGTTGCTGGACAAGCAGCATTACTGATCAAATTTTTGTTTTCTACTCACACATTGCAAGAATATGTGTCAAATGAGTTGATCAGATCTTTGACAGCTGCATTGGAAAGAGAGTTGTGGTCAACTGCCACAATCAACGAAGAGGTTTTGAAAACTCTGCATGTCATATTCATGAACTTCCCTAAGCTCCACATATCTGAAGCAGCAACTCTTTGCATTCCTCATTTAGTAGGGGCACTTAAATCTGGTAGTGAAGTGGCTCAGGATTCCGTACTAGACACCTTATGCTTGCTAAGACATTCTTGGTCAACCATGCCAATAGATATAGCAAAGTCTCAGGCTATGATTGCTGCTGAAGCCATTCCCATCTTGCAAATGCTCATGAAAACATGTCCCCCTAGTTTCCATGAGAGAGCAGATAGTCTTCTGCATTGCTTTCCTGGTTGTTTGACTGTCACCATTAAGCGTGGAAACAACCTCAAGCAAGCTATGGGGAGCACAAATGCATTTTGTCGGTTGACAATAGGCAACAGTCCTCCAAAACAAACCAAGGTTGTGAGTCACAGTATTTCTCCAGAATGGAAAGAAGGATTCACATGGGCATTTGATGTACCTCCGAAAGGCCAAAAGCTCTATATCATTTGCAAAAGCAAGAATACTTTTGGGAAGGCAACTCTTGGAAGAGTTACAATCCAAATTGATAAAGTGGTAAACGAGGGAATTTACAGTGGAATATTCAGTCTTAATCATGACAGAAACAAAGATGGCTCTTCCCGAACTCTTGAAATTGAGATTATATGGTCCAACAGGATATCTGACGATGACCTTTGA 6393 0.4186 MSKSPSPESQQSIYCSSRTRETNEAPEMDDPESTIATVANFVEQLHANMSSSHEKELITARLLGIARARKNARTLIGSHAQAMPLFISILRNGTPLAKVHVAATLSVLCKDEDLRLKVLLGGCIPPLLSLLKSELTEARKAAAEAIYEVSSGGLSDVHVGMKIFVTEGVVQTLWDQLNPKNKQDKVVEGFITGALRNLCGGKDGYWKATLEAGGVDIIVGLLSSDNAVAQSNAASLLAQLIVAFSDSIPKVIESGAVKALLCLVGRENDISVRASAANALEALSSKSTGAKKTIVSADGVSILIGAIVAPSKEFMQGNGQALQEHATRALANIHGGMSALVLYLGELSHSPRLPAPVGDIIGALAYTLMVFEEKDVDEQPFDATQIEDILVTLLKPRDHKIFRERVLEAMASLYGNICLSKRLDHAYAKKFLIGLITMAAADVQEHLILSLKSLCCDMVGIWEAINKREGIQLLMSMLGLSSEQHQEYAVQLLAILTDQVDDSKWAITAAGGIPPLVELLETGSQKAREEAAHVLWNLCCHSEDIRACVESAGAIPAFIWLLKSGGSRGQEASAMAMTKLVRIADSATINQLIALLLGDSPSSKAHIIQVLGHVLTVASQKDLLLKGSAANKGLRSLVQVLNSSNEETQEYAASVLADLFSTRQDICDSFVVDEIVLPCLKLLTSKNQVVATQSARALSALSRPNKGRSANKMPYIAEEDVRPLIELAKASSIDAAETAVAALANLIFDPFIAAEALAGDVVLSLNRVLAEGTLEGKQNASCALHQLLKHFPVDDVLKGNAQYRSTVLALVDSINAMNMDGADAADALEVVALLARTKRGVSFTYPPWSVLAEIPSNLEPLVCCLSEGPPLVQDKAIEILSRLCGDQLVVLGNFLAARSRSFSSLADRIMNSSSSEVKVGGAVLLFCVAKEHKELSMNALDNSGYLKSLIYSLVDMMKQNFSCSLAIGVRTSRDFMERSLFQKVDQIDIPYQAKVLGVTVALWLLSIIASFHIKNKLSIMEAGGLEALSNKLASHTSNSQTEFGDTGVWISALLLAILFQDENVVLSPATMHIIPSLTHLLRSGEVTDKYFAAQAMASLVCIGNKGINLAVANSGAVAGLISIIGNIESDMLNLVALLDEFSLVRNPDQVVLDQLFEIEDVRMGSVARKSIPHLVDLLRPIPERPSAPPVAVKLLTRIAEGSDTNKLIMAEAGALEALTTYLSLSPQDSTEAIISELLRILFCNSDLIKHEASTSSLNQLIAVLRLGSRNARYSAARALHELFDAENIRDSELAKQAIRPLVDMLNTTSGSEQEAALIALIKLTSGNSSKASLFTDVEGSPLQSLYQILSSASSLELKSNAAQICSVLFCNRKFRADPLALECIEPLISLMQSDSGTAIEYGVCAFERLLEDEYVELAAAYNVVDLLVSLVAGSNYQLIEATVSALIKLGKDRTPCKLEMVKAGIFDNCLKLLELAPSSLCSTIAELFRILTNSNAIARSSASAEIVEPLFHVLLRRDFDLWGQHSALQALVNILEKPQSLATLKLTPSQVIEPLISFLESPSQAIQQLGTELLSHLLAQEHYQQDITTKNAVVPLVQLAGIGILNLQQTAIKALEKISTSWPKAVADAGGLFELAKVIIQEDPQPPHALWESAALVLSNVLCSNADYYFKVPVVVLVKLLHSTNESTIMVALNGLIVHERSDASSAEQMMEAEAIDALLHLLRSHQCEEASGRLLEALFNNVKIREMKASKYAIAPLSQYLLDPQTRSQSGKLLAALALGDLSQHEGHARSRDSVSACRALISLLEDQPTEEMMMVAICALQNFVMNSRTNRRAVAEAGGILVIQELLLSPNPEVAGQAALLIKFLFSTHTLQEYVSNELIRSLTAALERELWSTATINEEVLKTLHVIFMNFPKLHISEAATLCIPHLVGALKSGSEVAQDSVLDTLCLLRHSWSTMPIDIAKSQAMIAAEAIPILQMLMKTCPPSFHERADSLLHCFPGCLTVTIKRGNNLKQAMGSTNAFCRLTIGNSPPKQTKVVSHSISPEWKEGFTWAFDVPPKGQKLYIICKSKNTFGKATLGRVTIQIDKVVNEGIYSGIFSLNHDRNKDGSSRTLEIEIIWSNRISDDDL 2130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0924 2130 Gene3D - 628 805 IPR011989 -
Bisa05g0924 2130 SUPERFAMILY ARM repeat 858 1129 IPR016024 -
Bisa05g0924 2130 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 255 299 IPR000225 GO:0005515
Bisa05g0924 2130 SMART C2_3c 2003 2099 IPR000008 -
Bisa05g0924 2130 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 511 553 IPR000225 GO:0005515
Bisa05g0924 2130 Gene3D - 1157 1342 IPR011989 -
Bisa05g0924 2130 CDD C2 2004 2094 - -
Bisa05g0924 2130 Pfam Armadillo/beta-catenin-like repeat 504 539 IPR000225 GO:0005515
Bisa05g0924 2130 Gene3D - 373 626 IPR011989 -
Bisa05g0924 2130 Gene3D - 1343 1600 IPR011989 -
Bisa05g0924 2130 Gene3D - 1605 2002 IPR011989 -
Bisa05g0924 2130 Gene3D - 27 156 IPR011989 -
Bisa05g0924 2130 Gene3D - 855 1150 IPR011989 -
Bisa05g0924 2130 Gene3D - 157 353 IPR011989 -
Bisa05g0924 2130 SUPERFAMILY ARM repeat 75 309 IPR016024 -
Bisa05g0924 2130 Gene3D C2 domain 2003 2128 IPR035892 -
Bisa05g0924 2130 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 12 2124 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Bisa05g0924 2130 SUPERFAMILY ARM repeat 217 1577 IPR016024 -
Bisa05g0924 2130 ProSiteProfiles C2 domain profile. 1983 2100 IPR000008 -
Bisa05g0924 2130 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1169 1213 IPR000225 GO:0005515
Bisa05g0924 2130 MobiDBLite consensus disorder prediction 1 21 - -
Bisa05g0924 2130 SUPERFAMILY ARM repeat 442 795 IPR016024 -
Bisa05g0924 2130 Pfam C2 domain 2003 2101 IPR000008 -
Bisa05g0924 2130 SMART arm_5 542 582 IPR000225 GO:0005515
Bisa05g0924 2130 SMART arm_5 202 242 IPR000225 GO:0005515
Bisa05g0924 2130 SMART arm_5 244 285 IPR000225 GO:0005515
Bisa05g0924 2130 SMART arm_5 1538 1579 IPR000225 GO:0005515
Bisa05g0924 2130 SMART arm_5 1580 1620 IPR000225 GO:0005515
Bisa05g0924 2130 SMART arm_5 621 661 IPR000225 GO:0005515
Bisa05g0924 2130 SMART arm_5 1284 1325 IPR000225 GO:0005515
Bisa05g0924 2130 SMART arm_5 500 540 IPR000225 GO:0005515
Bisa05g0924 2130 SMART arm_5 663 703 IPR000225 GO:0005515
Bisa05g0924 2130 SMART arm_5 1829 1869 IPR000225 GO:0005515
Bisa05g0924 2130 SMART arm_5 456 498 IPR000225 GO:0005515
Bisa05g0924 2130 SMART arm_5 1703 1744 IPR000225 GO:0005515
Bisa05g0924 2130 SMART arm_5 1411 1451 IPR000225 GO:0005515
Bisa05g0924 2130 SMART arm_5 287 335 IPR000225 GO:0005515
Bisa05g0924 2130 SMART arm_5 111 151 IPR000225 GO:0005515
Bisa05g0924 2130 SMART arm_5 1202 1242 IPR000225 GO:0005515
Bisa05g0924 2130 SMART arm_5 708 748 IPR000225 GO:0005515
Bisa05g0924 2130 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2001 2106 IPR035892 -
Bisa05g0924 2130 MobiDBLite consensus disorder prediction 1 30 - -
Bisa05g0924 2130 SUPERFAMILY ARM repeat 1580 2000 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0924 Bisa-ChrBisa05 15874925 15884388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0924 380 641 U-box Gene Family AT3G46510 28.571 1.98e-13 73.9