Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0914 ATGCCTACTCCAGTCACGAGCTTCATCTTCCTAATATGTGTTTTGTTTTTGGGACTTCACAATGAAAAACAGAAAACTGGGTGGAGGAAGTTTCTGTTCTATGTAGGTCCTGGTTTCCTCGTCTCTTTGGCTTACCTTGATCCTGGAAACTTGGAAACTGATCTGCAAGCCGGAGCTAACCACAGATACGAGCTGCTGTGGGTGATACTTATTGGGCTATTGTTTGCACTAATTATTCAGTCATTAGCTGCAAATCTTGGCGTCGCCACTGGAAAACACCTTTCAGAATTATGTAAAGCAGAGTACCCATTGCTTGTCAAGTACTGCTTGTGGTTGCTGGCCGAGGTTGCTGTCATAGCAGCAGACATACCTGAAGTGATAGGAACCGCCTTTGCTCTGAAAATACTGTTTCACATTCCAGTATGGGCAGGAGTACTCTTGACTGGCTTCTCCACTCTCTTGCTTCTGGGAGTCCAGAGATTTGGGGTGAGGAAGCTGGAACTGTTGATATCAACATTAGTATTTGTAATGGCAGGATGCTTCTTTGGGGAAATGAGCTATGTGAAACCACCAGCTTCTGATGTATTGAAGGGAATGTTTGTCCCAAAACTCAGTGGTCATGGAGCCACAGGCGATGCTATTGCCCTTCTTGGTGCCCTTGTCATGCCGCACAACCTCTTTCTCCACTCTGCTCTTGTGCTCTCTAGAAAAGTACCCAGTTCTGTGCGTGGCATCAATGACGCATGCAGATACTTCCTGATAGAGAGTGGGTTCGCTCTGTTTGTAGCATTTCTGATAAACGTTGCAGTAGTTTCAGTATCAGGCTCTGTATGCTCAGACAACGAACTTTCAGATGGTGATAAACATAGATGCGACGATCTTACTCTTGATTCAGCTTCTTTCCTTCTCCGGAATGTATTGGGAGGGTCCAGCTCAACCATTTATGCCGTAGCACTCCTAGCCTCAGGACAAAGCTCTGCCATCACTGGCACGTACGCAGGACAGTATATCATGCAGGGATTCTTGGACCTGAAGATGAAAAGATGGATTAGGAATTTGATGACTAGGTGCATTGCCATAACTCCTAGTCTTATTGTAGCCATCATTGGTGGATCATCGGGGGCTGGCCGCCTTATTGTCATAGCTTCGATGATACTTTCGTTTGAGCTTCCATTCGCTTTAATTCCACTCCTCAAGTTTAGCAGTAGCAGTACCAAGATGGGTCCTCACAAGAATTCTATGATTATCATTGTGATTTCGTGGATTCTGGGTTTGGGGATTATTGGGATCAACGTGTACTACCTGAGCACAGGGTTTGTGGGTTGGTTAATTCATAGCAGTCTCCCAAAGGTGGCAAATGTGTTCATTGGGATCATAGTGTTCCCTCTGATGGCAATTTATATTGTGGCCATTATCTACCTAACCTTCAGAAAAGATAGCGTTGAGACATTCATAGGGACAAATAATGACACTGAAGCGCAAACCCACATGGCAACGGGACTCCTTAATGCTAACGACCAATTAGAATTGAATCAAGTTCCTTTTAGAGAAGATTTAAGGGATATCCCACTTCCCCACTAG 1581 0.4485 MPTPVTSFIFLICVLFLGLHNEKQKTGWRKFLFYVGPGFLVSLAYLDPGNLETDLQAGANHRYELLWVILIGLLFALIIQSLAANLGVATGKHLSELCKAEYPLLVKYCLWLLAEVAVIAADIPEVIGTAFALKILFHIPVWAGVLLTGFSTLLLLGVQRFGVRKLELLISTLVFVMAGCFFGEMSYVKPPASDVLKGMFVPKLSGHGATGDAIALLGALVMPHNLFLHSALVLSRKVPSSVRGINDACRYFLIESGFALFVAFLINVAVVSVSGSVCSDNELSDGDKHRCDDLTLDSASFLLRNVLGGSSSTIYAVALLASGQSSAITGTYAGQYIMQGFLDLKMKRWIRNLMTRCIAITPSLIVAIIGGSSGAGRLIVIASMILSFELPFALIPLLKFSSSSTKMGPHKNSMIIIVISWILGLGIIGINVYYLSTGFVGWLIHSSLPKVANVFIGIIVFPLMAIYIVAIIYLTFRKDSVETFIGTNNDTEAQTHMATGLLNANDQLELNQVPFREDLRDIPLPH 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0914 526 Pfam Natural resistance-associated macrophage protein 52 413 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa05g0914 526 Hamap Divalent metal cation transporter MntH [mntH]. 5 439 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa05g0914 526 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 23 484 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa05g0914 526 NCBIfam Nramp family divalent metal transporter 36 402 - -
Bisa05g0914 526 PRINTS Natural resistance-associated macrophage protein signature 163 184 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa05g0914 526 PRINTS Natural resistance-associated macrophage protein signature 351 368 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa05g0914 526 PRINTS Natural resistance-associated macrophage protein signature 213 236 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa05g0914 526 PRINTS Natural resistance-associated macrophage protein signature 110 136 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa05g0914 526 PRINTS Natural resistance-associated macrophage protein signature 138 157 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa05g0914 526 PRINTS Natural resistance-associated macrophage protein signature 323 342 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa05g0914 526 PRINTS Natural resistance-associated macrophage protein signature 383 402 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa05g0914 526 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 29 405 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0914 Bisa-ChrBisa05 15745212 15749662 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0914 24 526 Inorganic Solute Cotransporters AT1G15960 61.630 0.0 627