Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0910 ATGGCAACCCAGAATCGTCGTTCGTCGTTTTCTTCGTCCACGACATCGTCGTTGGCGAAACGGCATGCATCGTCGTCGTCGTCGTCGGAGAATGTGGGAAAGGTCATGGCTGTACCTTCACACATGGCCAAGAAGCGAGCGCCTCTCAGTAACGTGACCAATCTAAAGAACGTGTCTCACACTGCTTCGCGAAACTCTCTGCCATCACCTACTCTGGTACCATGCGCAACTAAGATTGCCAAGACAAACAAGGAACCAACAATCTCGTTAAACGTTAAATCAAGTGCAGTTGTTTTCCCTAAGGTTACTTCACTTCCACAAAGGGATGAGGCTGCTCCTACAGTTGCAGCTATCACTGTTCCAGTTTCTACCAACGTGGATGTAAAACCCAGTGCAATTGTTTTCCCTAAGCTTGCTTCTCTCCAACAAAAAGATGAAGCTGCTCCTACAGCTTCCACTTCCACTATTCCTCTTTCCAGCATCATGGATGTTTCTCCTAGTAAATCAGACGGCACGTCTGTCTCTATGGATGAGAGCATGTCTCCTTGCGATTCAATCAAGAGTCCTGATGTTGAATATGTGGACCACAGTGATATTTCAGCAGTTGACTCTATTGATAGAAAGACATTCAACAGTTTGAACATAACGGATAATACAGATACAGCAGGAAAGGTTTGTAACAGAGACGTACTTGTTGAGTTGGAAAGAGAAGACAAAATTGTCAACATTGATAATAATTACATGGATCCACAGCTCTGTGCGACCTTTGCTTGTGACATCTACAAGCATCTCCGCGCATCTGAGGCAAAGAAAAGACCTTCTACAGACTTCATGGAGATAATTCAAAAGGACATAACTCCCAGCATGCGTGCTATATTAATTGACTGGCTTGTAGAGGTGGCTGAAGAGTATAGGCTTGTGCCTGATACATTGTATCTGACAGTGAACTACATAGATCGGTATCTCTCAGGGAATGCTATGAATAGGCAAAAATTACAATTACTTGGAGTTGCCTCCATGATGATTGCCTCTAAATATGAGGAGATTTGTGCGCCTCAGGTGGAGGAATTTTGTTATATAACTGATAACACATACTTCAAAGAAGAGGTTTTGCAAATGGAATCTGCTGTCTTGAATTACCTCAAATTCGAAATGACAGCCCCAACAGTTAAATGTTTCTTAAGACGATTTGTTCGTGCAGCTCAGGGAGTCAATGAGGTCCCATCCTTGCAAGTAGAGTGCTTGGCGAACTACATAGCCGAGCTGTCTCTCTTGGAATACTCAATGCTTCGTTATGCCCCATCACTTATAGCTGCTTCTGCAATTTTCCTGGCCAAATATATACTCTTCCCTTCCAAGAAACCATGGCATCCGACATTGGAGAGTTACACACTGTACCGCCCTTCTGATTTGTGTGACTGCATAAAAGATCTCCATCGTCTGTGTTGTAACAGCCATAGTTCTAATTTACCTGCAATCCCAGAGAAATACAGTCAACACAAGTATAAATATGTGGCTAAGAAGTATTGTCCTCCATCAATACCTCAAGAATTTTTCCAGAACTGA 1566 0.4317 MATQNRRSSFSSSTTSSLAKRHASSSSSSENVGKVMAVPSHMAKKRAPLSNVTNLKNVSHTASRNSLPSPTLVPCATKIAKTNKEPTISLNVKSSAVVFPKVTSLPQRDEAAPTVAAITVPVSTNVDVKPSAIVFPKLASLQQKDEAAPTASTSTIPLSSIMDVSPSKSDGTSVSMDESMSPCDSIKSPDVEYVDHSDISAVDSIDRKTFNSLNITDNTDTAGKVCNRDVLVELEREDKIVNIDNNYMDPQLCATFACDIYKHLRASEAKKRPSTDFMEIIQKDITPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNAMNRQKLQLLGVASMMIASKYEEICAPQVEEFCYITDNTYFKEEVLQMESAVLNYLKFEMTAPTVKCFLRRFVRAAQGVNEVPSLQVECLANYIAELSLLEYSMLRYAPSLIAASAIFLAKYILFPSKKPWHPTLESYTLYRPSDLCDCIKDLHRLCCNSHSSNLPAIPEKYSQHKYKYVAKKYCPPSIPQEFFQN 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0910 521 CDD CYCLIN_AtCycA_like_rpt1 249 384 - -
Bisa05g0910 521 MobiDBLite consensus disorder prediction 1 69 - -
Bisa05g0910 521 SMART Cyclin_C_2 388 511 IPR004367 -
Bisa05g0910 521 Pfam Cyclin, C-terminal domain 388 507 IPR004367 -
Bisa05g0910 521 SMART cyclin_7 392 480 IPR013763 -
Bisa05g0910 521 SMART cyclin_7 295 379 IPR013763 -
Bisa05g0910 521 Gene3D - 273 386 - -
Bisa05g0910 521 MobiDBLite consensus disorder prediction 1 34 - -
Bisa05g0910 521 SUPERFAMILY Cyclin-like 388 513 IPR036915 -
Bisa05g0910 521 FunFam Cyclin A1 375 507 - -
Bisa05g0910 521 MobiDBLite consensus disorder prediction 161 182 - -
Bisa05g0910 521 MobiDBLite consensus disorder prediction 50 69 - -
Bisa05g0910 521 SUPERFAMILY Cyclin-like 249 385 IPR036915 -
Bisa05g0910 521 CDD CYCLIN_AtCycA-like_rpt2 388 502 - -
Bisa05g0910 521 MobiDBLite consensus disorder prediction 161 187 - -
Bisa05g0910 521 Gene3D - 259 507 - -
Bisa05g0910 521 PANTHER CYCLINS 198 499 IPR039361 -
Bisa05g0910 521 Pfam Cyclin, N-terminal domain 259 385 IPR006671 -
Bisa05g0910 521 ProSitePatterns Cyclins signature. 290 321 IPR006671 -
Bisa05g0910 521 FunFam Mitotic cyclin 6 273 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0910 Bisa-ChrBisa05 15695874 15700094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0910 4 521 Core Cell Cycle Gene Families AT1G44110 59.615 0.0 571