Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0902 ATGTGCTCTGCAGAGGATTGGGTGAACTGGGGATCCTATCTTGATTATCTTCTTATAATGGTTTGCCATTGTAAACCACCATCAGAAGGTCGGTCTGGTTGTGGGGATGAATGTTTAAATCGGATACTCAACATTGAATGTGTTCAAGGAACCTGCCCATGTGGGGACTTCTGTTCAAATCAACAGTTCCAGCAACGCAAGTATTCCAGCCTGACATGGTTTAAATGTGGGAAAAAAGGTTATGGGTTGAAAGCACTTGAGGATATATCTAAAGGGCAGTTTCTTATTGAATACGTTGGAGAGGTGCTTGATATGCATGCTTATGAGGCACGGCAAAGAGAGTATGCTTTTAAGGGTCATCGACATTTCTACTTCATGACCTTGAATGGTAGTGAGTGTTCATATTATGTTGTGGCTCAGGTGATAGACGCAAGCGCAAAAGGAAACTTGGGACGATTCATCAATCATAGTTGTGATCCTAATTGTCGTACGGAAAAGTGGATGGTGAATGGTGAAATCTGTATTGGACTGTTTGCATTGAGGGATATTAAGCAGGATGAAGAGGTGACCTTTGATTACAACTATGTAAGGGTTTTTGGTGCTGCTGCAAAAAAATGTTATTGTGGTTCACCTCTATGTCGGGGTTATATAGGTGGTGGTGATCCGCTTAATGCTGAAGTTATTGTTCAAGGTGATTCAGATGAAGAATTTCCAGAACCAGTGATGCTTACTGAAGATGGTGAAGTTGAAGACAGTATACCTAGATCCAATGTTATGCAGGCTGATGGGCTTTTGTTAAAAGACAGGGATTTAGTGGACAAATCCGGAGGTTCTCTAGTGCCAAATAATAATCAGGAGAAAGGGAATTCTATAAACCCCTCTGCTATTTCCCATATGCACTGCTCATTAGAAGGGGAGGATTCAATAGGCAAGTTACCTCCTTCTGTTCATGCTGAAGAAGTTTCCCAACAAATGGAGGATCCAACTAGCAAATCCATGCCTCCTCTCCAACAAGGAGGATATGCATTGGAAGCAGAGCATCCTGACAAAACTTCCATTCAAAGATTAGAGACTTCTTCCACTACAACTACCAGTGAAGTGGTATCAAATTTTAAGAATAATAGGGAAGGCAAGTCTGAAATAGTTGATGACAGGCTATATTATTCAAAATCACGCCTGCTTGTGAAGACTTCTCGATTAAATGGTTCTGTTAAAAAGGGGAAGGTTCATGCTAATCATTCACAGGCCCTTAAAGGTGAGATGACAACCAAAAAATTGCAGGTATCATCTATTAAACCTAAGAAAATGGTGGAAGGTTCTTCTAATGGCCGTTTCGAAGCAGTTCAGGAGAAACTTAAAGAGTTGTTGGATGAGGATGGAGAAGGAGGAATAAGCAAAAGAAAAGATGCAACCAAAGGCTACTTGAAGCTTCTATTTCTCACTGTGGCATCTGGTGATAGGAACAACGGCGAAGCAATTCAAAGCAATCGAGATCTTTCCATGATCCTTGGCGCCCTTCTGAAAACAAAATCTAGAGCAGTGCTGAATGATATAATTAACAAAAATGGGTTACAGATGTTGCATAACATAATGAAGCAGTACAGGCGGGATTTCAAAAAAATTCCAATACTAAGAAAGCTTCTTAAGGTCTTAGAGCACCTAGCAGCAAGCAAGATATTGACATTTGAACACATTAATGGTGGCCCCCCTTGTCGAGGAATGGAGAGTTTTAGGGAGTCAATGCTGTCTCTGACAGAACATGATGACAAACAGGTCCATCAAATTGCTCGAAGCTTCCGGGACAGATGGATTCCTAGATCTTTCAGAAAACATGGCTATATGGACCGGGATGATTTAAGGGTAGAATCTCAGAGAAATTTCAACTGCAATAGATTTTCAACATCACACAGCCATAGGCGTGACCAAGATGCAAGACCCACGGAAGCTATAGATTGTGTTCAGCAGTCAAAGCTTGTGATAAATTCGGCAGATGTCAGTGCTCAGGAGGGCTGCTCTGCACTGTCTTTGGATGGCTGTAAAATAAATGGGACGAAAAGGCGTAAGCGTAAAAGCAGATGGGATCAACCAGCAGAGACAGTTTCAGATTCACCATCTAATCCGTGTAAAAAGCAAAATATTGACGCAGGGCTAGTACTGGAGAATGATGCAGCTATTAGCTCTTTTGATGGAAGCCAGAACATTACTGAAGATTTTCCCCCGGGGTTTTCATTCCCAGCTCAGCCGCAATTGGTTTCTTTAAATACTTCACCACACTCCAGTGATATTGCTTTGCAAAATGTGGGCAATTGCTGGTGTCCCCCAGAATCAGTAATTGGGCATCCAAAGGAGAAATATAATTCTCGTTTGTCCGTCTCATATGGAATGCCATTATCACTTGTCCAGCAGTATGGAACTCCTCATACTGAAATTTCAGAGAGTTGGGTCACCGCACCAGGCATGCCTTTCAGCCCTTTTCCTCCACTGCCCCGCTATCCTCGGGATAACAAAGAGTGTGAACCTTCTAATAATACTAATGCCGCAGCCATGGATCTGCCTGTTGAAATTCAGCAATGGGATATGAGTGGTCCAGTTAGTTGTTACTCCGATGATATGACTGGTACTAGCCCTAAAGACATTGACCTTTCACATGAGGATGATAAACACCTTTTTAAACGGGCGAAGAGTTCCTCTTGTGATTTGGGGAGGAGCTACTTTAGGCAGCAAAAATGGAATAATTCAAAAATACATCGACCGTGGTTCAGGAAGAATGCATGGGGATGTAATGGGAACAACACTACCGGTGGTATGTGCAGTATAGGTGTAGGAGATGAACTAAATGAGCCAGAAGTTACATGTTCTTCGGAGGATGTGATTTGTAGAGCGGAGAAAGGGGACAATAATGTTTAA 2907 0.4214 MCSAEDWVNWGSYLDYLLIMVCHCKPPSEGRSGCGDECLNRILNIECVQGTCPCGDFCSNQQFQQRKYSSLTWFKCGKKGYGLKALEDISKGQFLIEYVGEVLDMHAYEARQREYAFKGHRHFYFMTLNGSECSYYVVAQVIDASAKGNLGRFINHSCDPNCRTEKWMVNGEICIGLFALRDIKQDEEVTFDYNYVRVFGAAAKKCYCGSPLCRGYIGGGDPLNAEVIVQGDSDEEFPEPVMLTEDGEVEDSIPRSNVMQADGLLLKDRDLVDKSGGSLVPNNNQEKGNSINPSAISHMHCSLEGEDSIGKLPPSVHAEEVSQQMEDPTSKSMPPLQQGGYALEAEHPDKTSIQRLETSSTTTTSEVVSNFKNNREGKSEIVDDRLYYSKSRLLVKTSRLNGSVKKGKVHANHSQALKGEMTTKKLQVSSIKPKKMVEGSSNGRFEAVQEKLKELLDEDGEGGISKRKDATKGYLKLLFLTVASGDRNNGEAIQSNRDLSMILGALLKTKSRAVLNDIINKNGLQMLHNIMKQYRRDFKKIPILRKLLKVLEHLAASKILTFEHINGGPPCRGMESFRESMLSLTEHDDKQVHQIARSFRDRWIPRSFRKHGYMDRDDLRVESQRNFNCNRFSTSHSHRRDQDARPTEAIDCVQQSKLVINSADVSAQEGCSALSLDGCKINGTKRRKRKSRWDQPAETVSDSPSNPCKKQNIDAGLVLENDAAISSFDGSQNITEDFPPGFSFPAQPQLVSLNTSPHSSDIALQNVGNCWCPPESVIGHPKEKYNSRLSVSYGMPLSLVQQYGTPHTEISESWVTAPGMPFSPFPPLPRYPRDNKECEPSNNTNAAAMDLPVEIQQWDMSGPVSCYSDDMTGTSPKDIDLSHEDDKHLFKRAKSSSCDLGRSYFRQQKWNNSKIHRPWFRKNAWGCNGNNTTGGMCSIGVGDELNEPEVTCSSEDVICRAEKGDNNV 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0902 968 PANTHER SET DOMAIN PROTEINS 19 699 - -
Bisa05g0902 968 Gene3D SET domain 12 226 IPR046341 -
Bisa05g0902 968 SUPERFAMILY SET domain 18 215 IPR046341 -
Bisa05g0902 968 Pfam AWS domain 32 66 IPR006560 GO:0005634|GO:0042054
Bisa05g0902 968 SMART set_7 69 200 IPR001214 GO:0005515
Bisa05g0902 968 ProSiteProfiles SET domain profile. 61 194 IPR001214 GO:0005515
Bisa05g0902 968 SMART shorttest3 17 68 IPR006560 GO:0005634|GO:0042054
Bisa05g0902 968 Pfam SET domain 80 194 IPR001214 GO:0005515
Bisa05g0902 968 ProSiteProfiles Post-SET domain profile. 202 218 IPR003616 -
Bisa05g0902 968 ProSiteProfiles AWS domain profile. 17 67 IPR006560 GO:0005634|GO:0042054
Bisa05g0902 968 SMART PostSET_3 202 218 IPR003616 -
Bisa05g0902 968 CDD SET_SETD2 68 218 IPR044437 GO:0010452|GO:0046975
Bisa05g0902 968 FunFam Histone-lysine N-methyltransferase 15 233 - -
Bisa05g0902 968 MobiDBLite consensus disorder prediction 685 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0902 Bisa-ChrBisa05 15569339 15578056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0902 52 217 C2H2 Transcription Factor Family AT2G23740 33.143 9.57e-20 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bisa05g0902 SET 2.1e-20 No_clan