Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0899 ATGAGAATGCTGCAAGCGGGCCCGGCTGGACAAGCCCCCGACGGGAAGTCCGATGGCCGGACGGTGGTGGTGGGAGTGAAGCTGGATTCTCCCAGCAGGGAGTTGCTCACCTGGGCTTTGGTCAAAGTGGCTCAGCCTGGTGATACAGTGGTTGCGCTTCATGTTCTTGGTAACGATGAAATTGTGAATCGAGACGGGAAGGCTTCGCTTCTTTCGCTTGTCAAAGCATTTGACTCTGTTCTCGCCGTCTACGAAGGTTTCTGCAATTTGAAGCAGGTGGATCTCAAGCTCAAAATATGCAGAGGCTCCTCAGTCCGGAAAATCTTAGTTCGAGAAGCAAATGCCTATTCTGCAACTCATTTTATGGTAGGAACTGCGCAAGGGCTTCGTAAAATCCGGCCATCTACTTCCGTAGCTAAGTACTGTGCCAAGAAGTTATCCAAGGACTGCTGGGTTATTGCTGTTAACAACGGAAAAGTTGTCTTCAAGAGAGAAGGCTCACCAGCGGCTCCTGTTGATTTACAAGGAATTGATCGTCACGGCAAAAATCGCTTGCTTGGTTCAATTCAACGGACATTCAGTTATAGTACCAAAGTACTAAATGATGATAACACAGGAATACCAGACAAGGATACTTACAAAAATTCGGATAACAGCTTAGCTAAGGCCTTTCTGGATTCTACAGAAACTGTTCAGAAACGGAGCTGCTCAATTTGTGGCCCTACATCTGCGTTGCTAAACAATTCTTGTGACCAACCTGCAGAAGAATCTTCTGGTAATGGGGTTAAAGAGAACTCTTTGGCTATAGTTCTTGCTCAGACAACTGAGGCAGCAGTGAGTGCAAACATTCAGTCAGTCAGTGGATTGCCTGAACTCAAACCTGGTTGGCCACTACTACACAGGACAATTTTGTCAGACCGGCCATCTCCTGGCAGATCATTGGTGCGCCACATCTCTGTGGTTCAGTGGGCAATGCAGTTGCCCAGTAGAAAGCTTTCATTTGCTGCTGACCATGTTCACAAACAAACCAGTCCTGATCCAGGTCAATATCAATCTTTGGCTTTAGATAGCGAGAGTGGTGCTATTGTTCCAGTGAATGCTGATATAGGGACTGCTTCTTCACCTGATCACAATTCACGGAGAATTCCTAAAGAACTGGAGGGTGTTCATGAGAAATACTCATCCACCTGCAGATTGTTTAAGTACCAAGAACTTTTATCAGCAACATCAAATTTCTCCCCTGAAAACCTGATTGGGAAAGGAGGATGTAGTCAGGTTTATAGAGGCTGCCTTCCTGATGGCAAGGAGCTCGCAGTTAAGATCTTAAAGCCTTCTGATGATGTTTTAAAGGAGTTTCTTTTGGAAATAGAAATTATTACCACCTTGCATCACAAAAACATTATTTCTCTCCTGGGATTCTGCTTCGAGGAAGGGAACCTTCTTTTGGTGTATGATTTCTTATCAAGAGGAAGCCTTGAAGAGAATCTCCATGGGAATAAGAAAGATCCACACGTGTTTGGTTGGACGGAGAGGTACAAGGTGGCACTCGGTGTTGCTGAGGCTTTGGATTATCTGCATAATAGAGATGCTCAACCTGTGATCCATAGGGATGTAAAATCATCAAACGTATTATTATCTGAGGATTTTGAACCCCAGCTGTCTGATTTTGGACTTGCTAAATGGGCATCCCCCACGTCATCACATATAACCTGCACAGACGTTGCTGGAACCTTTGGTTACTTGGCTCCAGAGTATTTCATGTATGGTAAAGTAAATTCTAAGATTGATGTCTATGCATTTGGAGTCGTGCTTCTTGAGCTTCTATCAGGACGAAAGCCCATAAGTGCTGATTATCCAAAAGGTCAAGAGAGCCTCGTCATGTGGGCAAGTCCGATTCTGAATAGAGGAAAAGTTGCACAATTATTAGATCCAAGTTTGGGCAATTACTATGATCAGGACCAGATGGAGAGGATGGTCTTGGCAGCCACGCTTTGTATCAGACGTGCCCCGAGAGCTAGGCCTCAAATGAGCCTTATTACAAAGCTCCTTCAAGGTAATGCTGATGTAATAAAGTGGGCAAGGCTAGAAGTGAATGCTTCTGAAGCATCGGAAACGCTTGATGATGAAGCTTGTCCACCTTCAAATCTACAGTCACATCTCAATCTAGCACTTCTTGATGTGGAGGATGACTCACTCTCCATGTGCAGTGTTGAGCAAAACGTCTCGTTGGAGGACTACTTGAGGGGCAGGTGGAGCCGCTCATCAAGCTTTGACTGA 2277 0.4528 MRMLQAGPAGQAPDGKSDGRTVVVGVKLDSPSRELLTWALVKVAQPGDTVVALHVLGNDEIVNRDGKASLLSLVKAFDSVLAVYEGFCNLKQVDLKLKICRGSSVRKILVREANAYSATHFMVGTAQGLRKIRPSTSVAKYCAKKLSKDCWVIAVNNGKVVFKREGSPAAPVDLQGIDRHGKNRLLGSIQRTFSYSTKVLNDDNTGIPDKDTYKNSDNSLAKAFLDSTETVQKRSCSICGPTSALLNNSCDQPAEESSGNGVKENSLAIVLAQTTEAAVSANIQSVSGLPELKPGWPLLHRTILSDRPSPGRSLVRHISVVQWAMQLPSRKLSFAADHVHKQTSPDPGQYQSLALDSESGAIVPVNADIGTASSPDHNSRRIPKELEGVHEKYSSTCRLFKYQELLSATSNFSPENLIGKGGCSQVYRGCLPDGKELAVKILKPSDDVLKEFLLEIEIITTLHHKNIISLLGFCFEEGNLLLVYDFLSRGSLEENLHGNKKDPHVFGWTERYKVALGVAEALDYLHNRDAQPVIHRDVKSSNVLLSEDFEPQLSDFGLAKWASPTSSHITCTDVAGTFGYLAPEYFMYGKVNSKIDVYAFGVVLLELLSGRKPISADYPKGQESLVMWASPILNRGKVAQLLDPSLGNYYDQDQMERMVLAATLCIRRAPRARPQMSLITKLLQGNADVIKWARLEVNASEASETLDDEACPPSNLQSHLNLALLDVEDDSLSMCSVEQNVSLEDYLRGRWSRSSSFD 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0899 758 ProSitePatterns Serine/Threonine protein kinases active-site signature. 533 545 IPR008271 GO:0004672|GO:0006468
Bisa05g0899 758 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 19 156 - -
Bisa05g0899 758 CDD USP_Like 21 153 - -
Bisa05g0899 758 Gene3D Transferase(Phosphotransferase) domain 1 487 701 - -
Bisa05g0899 758 Gene3D Phosphorylase Kinase; domain 1 375 486 - -
Bisa05g0899 758 Pfam Protein kinase domain 415 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g0899 758 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 20 153 - -
Bisa05g0899 758 ProSiteProfiles Protein kinase domain profile. 412 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g0899 758 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 381 486 - -
Bisa05g0899 758 FunFam Putative receptor-like serine/threonine-protein kinase 487 699 - -
Bisa05g0899 758 SMART serkin_6 412 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g0899 758 PANTHER OS08G0249100 PROTEIN 214 695 IPR046958 -
Bisa05g0899 758 Gene3D HUPs 19 156 IPR014729 -
Bisa05g0899 758 Pfam Universal stress protein family 20 153 IPR006016 -
Bisa05g0899 758 SUPERFAMILY Protein kinase-like (PK-like) 393 685 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0899 Bisa-ChrBisa05 15542034 15545534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0899 399 679 Trihelix Transcription Factor Family AT1G68690 46.341 2.90e-76 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Bisa05g0899 Pkinase 1.3e-42 CL0016