Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0898 ATGGATCACCCCTCCTATTTCCATCACCAACATCAACATCAGCATCAGCATCCAAGGTACGCTCCTTTTCCCCCTCAGCAACCTCGCCATTCACAGTTTCCCGAGGATCCCCTTTTGCGCCCTCACCACCTTCCTCCGCCGCCTCCTGCGGCACCCGCTCTCCCACCGCCGCCACCGCCTCCTCCTCTTCTGTCCTATCGCAACATCCGTACTCCTCCTCCGCCGCATCCTCACCCCTACAATCCTCCTCATCAATCCCAGTTCTCTTTCAATGCCCCGAACTATGCCCACCGACCGGCGGAAGAGGAACGGCTGGTATCTGCCAACGTCCCTCATGATTTTGCTCACTCACAGAGGGTTTCTAATCGGATAATCGTTGATAATGATCGTCCCCGTCATAGTCTACCTGATTTTGATCGTTCTAATTCCGATAACCGTATCGGGGTTTGGAACCCACCCAGGGTTTTGTCGGATAATCGGCCGTCGAGGCCCTACCCTCCCGTTGACTTTGACCGGGAATTGCATCATCATCAGCACCAATTGAATCACAAAATAGCGGCACCATATCCGCCAATTGATAAACTTAGGTATGACTCGGAGGGCAGCTCAAGGATAAGGGTTGATCACATTGATGGGTATGAAGTTAAGGCAAGGGAAGAGTTTGCATGGGGTCGTGGTGATGAGAGATATCATCGCCGTGGGGATTTTGTACCAAATCTTGATAAATCTTCTGGAGACTTCGGAATTATGACGAGCCAGAGTACATTATCAAGGGATATTCAGTTGTATGGTGTGGAACGTGACAACGAAATATCTAGGGGTAGTAGAAGAGACGGACTTGGTGATAGCAAGAGGTGGGTAAATGATAGGAAGGCCCCTAGAGACCCACACAGTTCATCTTTTGAATTGGGAAATAATGAGAACGGTGCTGGAGATGGTATTCGGGTAACTTCTGGAAAGTATTATGGTTCAGAAATGGGTAGGTATAATAATAGAGGAAACAGGGACCCTGCTCATGAATATATTCGCACTCCAAAGAAACAAATTCAGAAAAAGAGTGCTCTTCTTAGAATTCAAAAACCAAATTATAGAAACCGTGAGGTTGAACCGTTACATTATACCAGCTATGCTGATGATTCTGACTCTAATTCCTTTAGAGGTAAAGATCAGTTTGAGAATTCAGGTTATGGGATGAAAACAGAAGAGAGAGAAGGAAGCCCTGTTGAACTTGATATTTCCTTTAAATCTAATTCTTTGGTGGCCAAGGCTATTGTGGCACCTACAAGTTCTGCACTTGTTTCTGATGCAGACATGATCACAGTTTCTGATACAGATTTGACTTCTGCAGAAAAGAGAAAAAATGGTTTGGTCTCTGACAGTGACTGTTCTGATTTAAAGCCAGCCAAACCATCTGTAGTTGCTGTAAGCTTAAGTAGCTCACCATGCAAGGCTAATGGCATCCCTAATTCTGGCAAGGACTTTAACTTACAGAAGAACATCTCCAATAGTTGCTCTCAGCCTTGTTCCCGTGTACCTCCCAATCATCATGGAAAAAATGAGGGGGCACAAAAACAAAACAGAACTGTTTCAGATGAAAGTACCAAGGTTTGTTCTGGTAAAACATCTCCAAGGGTTGGTAAGAAGAAAATAATCATAAAGAAAGTGGTGAAGAAAGTTGTTTCGAATCCTAATTTAAATGTGTCAAGTTCCATATCATCAAATATGCTTGATGGAACTGTGCGAACAGATAGTGTCAGTCCTTCGTTCACCTCTGGATCTGACAAAACTGAAACTTCTTTGAAGGATGAAATCACTGCTTTTGACAAGATGTCCACGCCAAGTTGTTTGCTGTCTTCTCCAAGAGAGGGGAAGCTGTTTCCTGATTACACGAAGGAAGATATAACACTGCAGAGTGTGGAGCCACATACCAGTTCACAAGAGTACAAGACTGATGATAATTCTGACATAGGGCATGTAGCTCGAATTGAGAGAAACGAAAACATTTCTAATTCTTCATCAGGTGCTTCTAGTATCAAAGATGAAAAAAGTGATTCTGATTGTCTGGATGCAGATAATTTTGTACATGGTTTGTGTGGCATGTCAAAAGCTGATAAGGTTGTTATGACTGAGTCACTAAATGGAAATACTTTTCCTGATATCAGTAACTTGGATGATGTTAATGTGCACCTTTGTCAGAATGAAGTGTCCCTATCACCTGGGCAGTATTCAAATGTACAATGTCTAGAGAATAGGTATCATGTAGAAGATGATAAGAACTCCAGACTGTCAACATCGGGTGAGACTGACATTAACACAGATGTTATAAACACCTGTAATTCTGCTAATGTTAGAATTGCTGGCTTGATTTTCAATGACCTTACGGGTAGTGCACAACAGAGTATTACATATTGTGACATAAAAAATGATGGTAAGGTAGATTGCAAAAGTGAGGCCCTTCTGTTAACCGAGAATGCTATATTAGAAGAAAATCAAGAGATTTTCTTCCCTGTACCAAGCTGTGAAATTGTTGGTCTTTCAAGTTCTGGAGAAACTAGGACTCAAGATGGTCCAAAATGCCTAGAACATTCTGCATCCATGAATAGTTCTTATACCAATTCAGAAGATAGTATCACTGTTCCCCATAGTGTTATTGTCAATGATTCTGCAAAGCAGGCATCTCCTGAGGATGCCACCTTATCTTCTGAAAATTGTACCCCAGATCAATTCCCAAATTCTGAATTTTCAGTTGGATTTGGTGAAGGAGATACAAATAAGTCCAAAAAGAGAAAAGTTGGGACTCAATCAAATTTTTCAAGTTCAAATATAAGAGGCATATCTTCAGACCCTATACATACAGTTAGCTTTGAAAATGTGGATACAACTATAAGTTTGAGGGATCCAAGTCCTTCAGAAGTTTTAGATTCTAATGTTCAAAGCTCAGATTTTAGCTTACAATCCATTATGGGCAGGGTCTCTGATTTACATGGGAAAGGGGAGGTTTCAGAGGCTGAAGTTTATTCTGGAAATAATGGCAATAACAGTGTCAATAGGCCCTCACCAATTTCGAAAATAAATGAAACCACTACTGGTCACCTGAATTTCACTTTATGTCAAGCTGAACTTTGTGATGCAATTGTGGTTGCCACATCTTGTGCAGAAGTTCCTATTAGGATTAGTGATAACCAGACACATGAGAAAGAAGTTGCATTTTCAAGCACGGCTAAACTGTCTACTTCTCCATCACTGGCTTATCCAGAGGATAGTTGTAAATTGTCTGACAATAGTTTGGTGAGAGAATCCACCGAGTCTCCAGATGCAAATAGCGAACCTATGAAGTCTAAGTGTTCCAAATTGCAGCACCTAGGCATCGAGTACCATTCGGTTCTTGAGGACTTGGCCATTCCAAATGATCAGTTTCCAGTGTTGGAACATGGGCAGAAAGAAAATGGTACTCTAGTTGTGTCAATAAATAATACTCAAAAGGATATTCTGGTTATAGGAAATACTGAGGGAGAAAAGATTGATACACAGGCTGATAAAAAATGTCAGTCTAGAGACTCTGTAAAAATATTTCCAAGTGCTGCTTTGGAACCCAGTGATCTTCAAACTAAGGAAAATTTACCTTTTGAGCATGACTGTCTGTCCTGCCCAGCTGATACTGATGGAGTAACTGTTAGTAACTCTAATACAGTATCAGATTTGTTTTCTCCAGGGACCACATCTGATGTACCTGATAGAAGGATTTCAGATTGTCAGGCAATTGACAAAGATAGCATTCGAGGGGATGAAGTGAACGCTGATAGCAGTTCTAATGTTGAACATGGTTTGGACTTACCTGCTTCAACATTATCTTCGCATCATACTGCAAAGAATATGAAGTCAGATCATGCAACTAGCCGTGATAACCTGAGCATGGGGAAGATAATGCAACAACCTTTGCAAGTTGATTCCAAAGTTATGCCTCAGGGATTGAATTCATCTTTTTCAAAATTTAGTGGGGGCAAAAATCAGCCAGGCTATGGCATTCCTACGACTATCCAGGGTCGATCATTTGTCATTTTTCCTAAGGCAAAGACATCTTCATCGTCGACTCATGTTTCAAAACTTCGAACTTGGCATCGCACAGGTAATAATTCTGCTTCTCTACCAAGAAGCAAGCCTTCAGGAGGATTTGTTCCTCCCAATAAGCCAGTTTCAGAGAAGAAAGGCAACTTCCAAAATACTTCTTACATTCGTAAAGGTAACAACAGTCTTGTAAGGAAACATACTGCAGATTCTGCTTTACCGCAAAGCTTTGTTAATCAGTCTCCTTTGGGGTTTGATGAATTTTATAAGGGCACTGGATCTGAAAGTAAAGTTGACATCACAGATCAAACAAATCTCTTGAAAACAGGATTAACACATGCTCCTCTGGAGAGGCAGAGAACACCTCCACTACCTGTTGACCCAATATTACCTAATCAAATGACAACTTCATCTGAGGAGAATAGATCTTCCCCAACGATAGAGCCTCTCTCCAATGCTGACTCTGATAATGCCTCAGAACCTCGAAAAATCACAGAACCTTGTGATGCCTTAAACTCTGCTGAGGATGCACTAAAGTCTTATGAAACTGTTGAAAATCAAACTGTTCAATCTAACACTGGGGAGAGTCAAGTTGAAGCAAATGATGGGAATGTGTCATCTTTAAATTCAAAGAGAATAGTATATGTAAAGCGGAAGTCAAATCAGTTGGTTGCAACATCAAATTCTTGTGATCTTTCTGTTACTGATGACAATGCCCAAACAGCTGCCTCTGATGGCTACTATAAGAGGAGGAAAAATCAGTTAGTTAGGACTGCATTTGAAAGTCATATCAACCAGACAGTTGGAATGCCCAATATAGCTGTAAACTCTGATGGGCAAGGGACTCGTAAGGCTGTTTGTAACAGGAGGTTTAGTAAGAGGCGATCACATAAGGTTGTTGGAAATTCGTGCAAACCTTTGAGAGCCTCATTGGTGTGGACACTTTGTGGCGCAAATTCATCCAAAAATGGCACTGACTCTGTGCATCGTCCGAAGGTTTTGCCTTACTTGTTTCCATGGAAAAGAGCAACATACTTAAGAAGTTTCATTTATAATCCTGCTTTGAGCTCCAACACCAGTTCATTATCTGCTATTGGCAAAAAATTGGCTTTGTTGAGAAAGAGGGATACTGTTTACACTAGGTCAACCCATGGATTTTCCCTCCGGAAATCCAAGGTATTAGGTGTTGGTGGATCTAGTTTAAAATGGTCAAAATCCATTGAGAAGTCCTCTAAGAAAGCTAATGAGGAAGCTACACGTGCAGTTGCTGCAGTAGAGAGGAAAAAGAAAGAACAGAAAGATGTTGCTTGTATCAATTCTAGGGCAAAGAGAGAACGCATATTTCGTTTTGGTACAGTTCGTTACAGAATGGACCCTTCTGGGAGGACACTTCATAGAATTTCAGACGATGAGTCCCTTTCCTCTGCTTCCATCCATTCAGGTTTGCCTGCGAAAAGATCTTATATTCCAAGACGATTAGTTATTGGAAATGATGAATATGTCCGAATTGGCAATGGTCATCAGCTTATCAGAGACCCAAAGAAGCGAACTCGTTTATTGGCAAATGAAAAAATTAGATGGAGTTTACACACAGCCAGACAGCGGTTGGCACGAAAGCAGAAGTATTGTCAGTTTTTTACTAGATTCGGGAAATGTAATAAGGATGACAGGAAGTGTCCCTATATTCATGATCCCTCAAAAATCGCTGTCTGTACTAAGTTTCTGAATGGTTTATGTTCTACTCCCAACTGCAAATTGACTCACAAGGTTATTCCAGAAAGAATGCCAGATTGCTCTTATTTTTTGCAAGGTTTATGCACAAACAGAAATTGCCCATATAGACACGTCAATGTGAACCCCAAGGCATCCATATGTGAAGGATTTCTGAGGGGTTATTGTGCCAATGGCAATGAGTGTCGGAAGAAGCACACCTATGTCTGCCCTACTTTTGAAGCAACAGGAATCTGTACCCAAGGGACCAAATGCAAACTTCACCACCCTCAGAAACAATGCAAGGGAAAGAAAAGGAAGAGATCTGGAGATCGGAAGAACAGTAGAGGTCGTTACTTTGGTTCTATGCCCATTGATGTTTCTGAACCTGGTATGACGGTAGCTCCAAGGCAAGGGGAACAAAATAATGATGATCTTGAAGGAAAACTCGCTGACTATATCAGCCTTGATGTCGATGATGAAGAAATTGCAGAAAGCAGTGGCCAACCAAGCGAGCAAGTAACTTTGTGCGACAGTGAACCCATGGATATACAATTAGATGATCTTGATGAATTTATCAAACCGATTCTTTTAATTAAAAGGGATTTCAGAGCACAGGCATCTCCAGTATGA 6408 0.4134 MDHPSYFHHQHQHQHQHPRYAPFPPQQPRHSQFPEDPLLRPHHLPPPPPAAPALPPPPPPPPLLSYRNIRTPPPPHPHPYNPPHQSQFSFNAPNYAHRPAEEERLVSANVPHDFAHSQRVSNRIIVDNDRPRHSLPDFDRSNSDNRIGVWNPPRVLSDNRPSRPYPPVDFDRELHHHQHQLNHKIAAPYPPIDKLRYDSEGSSRIRVDHIDGYEVKAREEFAWGRGDERYHRRGDFVPNLDKSSGDFGIMTSQSTLSRDIQLYGVERDNEISRGSRRDGLGDSKRWVNDRKAPRDPHSSSFELGNNENGAGDGIRVTSGKYYGSEMGRYNNRGNRDPAHEYIRTPKKQIQKKSALLRIQKPNYRNREVEPLHYTSYADDSDSNSFRGKDQFENSGYGMKTEEREGSPVELDISFKSNSLVAKAIVAPTSSALVSDADMITVSDTDLTSAEKRKNGLVSDSDCSDLKPAKPSVVAVSLSSSPCKANGIPNSGKDFNLQKNISNSCSQPCSRVPPNHHGKNEGAQKQNRTVSDESTKVCSGKTSPRVGKKKIIIKKVVKKVVSNPNLNVSSSISSNMLDGTVRTDSVSPSFTSGSDKTETSLKDEITAFDKMSTPSCLLSSPREGKLFPDYTKEDITLQSVEPHTSSQEYKTDDNSDIGHVARIERNENISNSSSGASSIKDEKSDSDCLDADNFVHGLCGMSKADKVVMTESLNGNTFPDISNLDDVNVHLCQNEVSLSPGQYSNVQCLENRYHVEDDKNSRLSTSGETDINTDVINTCNSANVRIAGLIFNDLTGSAQQSITYCDIKNDGKVDCKSEALLLTENAILEENQEIFFPVPSCEIVGLSSSGETRTQDGPKCLEHSASMNSSYTNSEDSITVPHSVIVNDSAKQASPEDATLSSENCTPDQFPNSEFSVGFGEGDTNKSKKRKVGTQSNFSSSNIRGISSDPIHTVSFENVDTTISLRDPSPSEVLDSNVQSSDFSLQSIMGRVSDLHGKGEVSEAEVYSGNNGNNSVNRPSPISKINETTTGHLNFTLCQAELCDAIVVATSCAEVPIRISDNQTHEKEVAFSSTAKLSTSPSLAYPEDSCKLSDNSLVRESTESPDANSEPMKSKCSKLQHLGIEYHSVLEDLAIPNDQFPVLEHGQKENGTLVVSINNTQKDILVIGNTEGEKIDTQADKKCQSRDSVKIFPSAALEPSDLQTKENLPFEHDCLSCPADTDGVTVSNSNTVSDLFSPGTTSDVPDRRISDCQAIDKDSIRGDEVNADSSSNVEHGLDLPASTLSSHHTAKNMKSDHATSRDNLSMGKIMQQPLQVDSKVMPQGLNSSFSKFSGGKNQPGYGIPTTIQGRSFVIFPKAKTSSSSTHVSKLRTWHRTGNNSASLPRSKPSGGFVPPNKPVSEKKGNFQNTSYIRKGNNSLVRKHTADSALPQSFVNQSPLGFDEFYKGTGSESKVDITDQTNLLKTGLTHAPLERQRTPPLPVDPILPNQMTTSSEENRSSPTIEPLSNADSDNASEPRKITEPCDALNSAEDALKSYETVENQTVQSNTGESQVEANDGNVSSLNSKRIVYVKRKSNQLVATSNSCDLSVTDDNAQTAASDGYYKRRKNQLVRTAFESHINQTVGMPNIAVNSDGQGTRKAVCNRRFSKRRSHKVVGNSCKPLRASLVWTLCGANSSKNGTDSVHRPKVLPYLFPWKRATYLRSFIYNPALSSNTSSLSAIGKKLALLRKRDTVYTRSTHGFSLRKSKVLGVGGSSLKWSKSIEKSSKKANEEATRAVAAVERKKKEQKDVACINSRAKRERIFRFGTVRYRMDPSGRTLHRISDDESLSSASIHSGLPAKRSYIPRRLVIGNDEYVRIGNGHQLIRDPKKRTRLLANEKIRWSLHTARQRLARKQKYCQFFTRFGKCNKDDRKCPYIHDPSKIAVCTKFLNGLCSTPNCKLTHKVIPERMPDCSYFLQGLCTNRNCPYRHVNVNPKASICEGFLRGYCANGNECRKKHTYVCPTFEATGICTQGTKCKLHHPQKQCKGKKRKRSGDRKNSRGRYFGSMPIDVSEPGMTVAPRQGEQNNDDLEGKLADYISLDVDDEEIAESSGQPSEQVTLCDSEPMDIQLDDLDEFIKPILLIKRDFRAQASPV 2135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0898 2135 ProSiteProfiles Zinc finger C3H1-type profile. 1892 1921 IPR000571 GO:0046872
Bisa05g0898 2135 MobiDBLite consensus disorder prediction 272 297 - -
Bisa05g0898 2135 MobiDBLite consensus disorder prediction 1375 1403 - -
Bisa05g0898 2135 FunFam zinc finger CCCH domain-containing protein 3 1922 1973 - -
Bisa05g0898 2135 MobiDBLite consensus disorder prediction 1539 1559 - -
Bisa05g0898 2135 Gene3D - 1919 1974 - -
Bisa05g0898 2135 MobiDBLite consensus disorder prediction 2028 2055 - -
Bisa05g0898 2135 ProSiteProfiles Zinc finger C3H1-type profile. 1947 1973 IPR000571 GO:0046872
Bisa05g0898 2135 MobiDBLite consensus disorder prediction 1005 1022 - -
Bisa05g0898 2135 MobiDBLite consensus disorder prediction 571 595 - -
Bisa05g0898 2135 Coils Coil 1766 1790 - -
Bisa05g0898 2135 MobiDBLite consensus disorder prediction 661 682 - -
Bisa05g0898 2135 MobiDBLite consensus disorder prediction 1258 1302 - -
Bisa05g0898 2135 SMART c3hfinal6 1921 1945 IPR000571 GO:0046872
Bisa05g0898 2135 SMART c3hfinal6 1947 1972 IPR000571 GO:0046872
Bisa05g0898 2135 SMART c3hfinal6 2001 2023 IPR000571 GO:0046872
Bisa05g0898 2135 SMART c3hfinal6 1974 2000 IPR000571 GO:0046872
Bisa05g0898 2135 SMART c3hfinal6 1892 1920 IPR000571 GO:0046872
Bisa05g0898 2135 MobiDBLite consensus disorder prediction 272 316 - -
Bisa05g0898 2135 PANTHER CCCH ZINGC FINGER 339 2127 - -
Bisa05g0898 2135 MobiDBLite consensus disorder prediction 1093 1113 - -
Bisa05g0898 2135 MobiDBLite consensus disorder prediction 1 91 - -
Bisa05g0898 2135 MobiDBLite consensus disorder prediction 1485 1513 - -
Bisa05g0898 2135 MobiDBLite consensus disorder prediction 1264 1288 - -
Bisa05g0898 2135 MobiDBLite consensus disorder prediction 917 943 - -
Bisa05g0898 2135 FunFam Zinc finger CCCH domain-containing protein 7 1975 2036 - -
Bisa05g0898 2135 Gene3D - 1975 2035 - -
Bisa05g0898 2135 MobiDBLite consensus disorder prediction 571 598 - -
Bisa05g0898 2135 MobiDBLite consensus disorder prediction 523 540 - -
Bisa05g0898 2135 MobiDBLite consensus disorder prediction 504 541 - -
Bisa05g0898 2135 MobiDBLite consensus disorder prediction 664 678 - -
Bisa05g0898 2135 MobiDBLite consensus disorder prediction 1094 1113 - -
Bisa05g0898 2135 MobiDBLite consensus disorder prediction 39 82 - -
Bisa05g0898 2135 ProSiteProfiles Zinc finger C3H1-type profile. 1974 2001 IPR000571 GO:0046872
Bisa05g0898 2135 MobiDBLite consensus disorder prediction 1003 1022 - -
Bisa05g0898 2135 MobiDBLite consensus disorder prediction 1467 1522 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bisa05g0898 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0898 05 15502215 15521166 Bisa05g0898 05 15502215 15521166 ECH