Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0873 ATGTCAACCTCTGGGATCACACTTAGCTTGTTCCTAGTTGCAGCAGCGACGACAACATGGGTTTCTGGTCTGGCCAAAGAGGGTTGCAGAAGGACGTGCGGCGACCTTAACATTCCGTACCCATTCGGTACAAGCGAAGGTTGCTACATAGACAAAAATTTCTTCATTAACTGTACCACCACTTCCTCTGGGAAACCCATACCATATCTCTCCACAGCCACCGTTAAAGTGGTGAACATCTCTCTCGACGGCGAATTGCGCGTCGCGCCATGGCTTTGTGTGGATTGCTACAGTTCCTTTGGCAGGGAGAATTCGAGCTCCTGGCAGATCCCATTTGGTCAGTTTGCTGTATCAAACACCAAGAACAAGTTCACTGTCGTTGGCTGCGACACCAATGCTTTCATCAAGGATTACAGGGGAAGCTTCACAACTGGCTGCACTTCCATATGCAGGAGCCTCAATGACGTGGTCGATGGAACTTGCTCCGGCATCGGCTGCTGCCAGTCCAGTATTCCGCCAAGAAACATGGGTTACACTATCACCTTGAGAAGCTATTACGACCACTCTTATGTTTTGAGCTTTAATAATTGTAGCTATGGCTTTGTGGTTGAAGACGGTGCTTACAATTTCTCCTCTCAGGACCTCCTTTATATGCCATACAATACTGAATTCCCTGTGGTCCTCGATTGGGCTATTGGGAATAAGAATTGCTCTGAAGCCAAAAAGAACAGGAGCAGCTATGCTTGCAAGGAGAACAGCGGCTGTGTCGATTCTCAAAATGCTCCTGGCTACTTTTGCAAATGCAACAATGGGCTTGAAGGGAATCCATACCTCTCTGATGGCTGCAAGGACATTAACGAGTGCAGCAACAACACATCCAATAACTGCACTCAAACATGCCACAATTCCTATGGCAGTTATAGCTGTTCTTGTCTACCTGGATTTAGAGGAGATGGTTTTAAAAACGGAACAGGTTGCGTTTCAGAGGGTCAATCTAATGGTCCCCCAGTCTTGCAGATTGCCCTGGGCATCAGCGTATTCTGCTTGGTTCTAGGTATTGTAGTAGCCTCCTTATGCTGGGTACAAAGGAAAAGGAACCTCATAAACATCAAGAAGAAGTTCTTTGAGCAAAATGGGGGCCTCATGCTTCAAGAGCAACTTTCTGAGCGACAGGGTTACAATGATATGGCAAAGTTATTCAGCGAAGAGGAGCTCAAGGAAGCCACAGATGACTTCCATGAAAGCAAGATTCTTGGGCGTGGAGGCCAAGGAACAGTTTACAAGGGAACATTATCAGATAACAGAGTGGTCGCCATCAAGAAGTCCAGAATAACAGACCAGAGTCAAGTCAAAGATTTTATCAATGAAGTGCTTCTACTCTCTCGAATCAATCACAGGAATGTAGTCAAACTTTTAGGGTGTTGTTTGGAAACTGAAGTTCCCTTGCTAGTTTATGAATATATCCATAATGACACTCTGCTCCACCATATAAACTCGTCAATGAAAACTTCATGTCTTCCATGGAAGACTCGATTAAGGATAGCTGTTGAAACTGCTGGAGCCATATCATACTTGCATTCTGCGGCTTCCATTCCTATCATTCATAGGGATATAAAGTCGAGTAACATATTGTTGGATCATAATTACACAGCTAAAGTATCTGATTTTGGAGCCTCCAGGTTGATTCCTTTAGACCAAACTCAAATTACTACACTTGTGCAAGGAACATTGGGATACTTAGACCCTGAGTACTTGCAAACCAGCCAGTTAACCGAAAAAAGTGATGTTTATAGTTTTGGAGTTGTGCTTGTGGAGTTGCTAACTGGAAAGAAGGTGGTTGAAGTGAGCAGGCCAGAAGAAGATAGAAATCTGGCTATGTACTTTGTTTCTTCAATGAAACAAGGCCGCTTGCTAGAGGTTCTAGATAGTAGAGTGATAGATGACAAAAATGTAGGGCAAATGAAGGAAATTGCTGTGTTGGCAAGTAGATGTATAAGAGTAAAGGGAGAAGAGAGACCAACCATGAAGGAAGTATCAATGGAGCTAGAAGGGCTAATGGCAATGGAGAAGCATCCTTGGGATGGAAAACATATGAATTTAGAGGAAAATGAGTACTTACTTGGTGAAATACATGAAAGTGGCACTGGCAGTACTAGCAATTCTTTAGGGATTGAAAGCATAAGGAATCAAATGGATGTTGAGATTGAAAGTGGACGATGA 2220 0.4383 MSTSGITLSLFLVAAATTTWVSGLAKEGCRRTCGDLNIPYPFGTSEGCYIDKNFFINCTTTSSGKPIPYLSTATVKVVNISLDGELRVAPWLCVDCYSSFGRENSSSWQIPFGQFAVSNTKNKFTVVGCDTNAFIKDYRGSFTTGCTSICRSLNDVVDGTCSGIGCCQSSIPPRNMGYTITLRSYYDHSYVLSFNNCSYGFVVEDGAYNFSSQDLLYMPYNTEFPVVLDWAIGNKNCSEAKKNRSSYACKENSGCVDSQNAPGYFCKCNNGLEGNPYLSDGCKDINECSNNTSNNCTQTCHNSYGSYSCSCLPGFRGDGFKNGTGCVSEGQSNGPPVLQIALGISVFCLVLGIVVASLCWVQRKRNLINIKKKFFEQNGGLMLQEQLSERQGYNDMAKLFSEEELKEATDDFHESKILGRGGQGTVYKGTLSDNRVVAIKKSRITDQSQVKDFINEVLLLSRINHRNVVKLLGCCLETEVPLLVYEYIHNDTLLHHINSSMKTSCLPWKTRLRIAVETAGAISYLHSAASIPIIHRDIKSSNILLDHNYTAKVSDFGASRLIPLDQTQITTLVQGTLGYLDPEYLQTSQLTEKSDVYSFGVVLVELLTGKKVVEVSRPEEDRNLAMYFVSSMKQGRLLEVLDSRVIDDKNVGQMKEIAVLASRCIRVKGEERPTMKEVSMELEGLMAMEKHPWDGKHMNLEENEYLLGEIHESGTGSTSNSLGIESIRNQMDVEIESGR 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0873 739 ProSitePatterns Serine/Threonine protein kinases active-site signature. 533 545 IPR008271 GO:0004672|GO:0006468
Bisa05g0873 739 SUPERFAMILY EGF/Laminin 284 320 - -
Bisa05g0873 739 Pfam Protein kinase domain 412 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g0873 739 SUPERFAMILY Protein kinase-like (PK-like) 394 687 IPR011009 -
Bisa05g0873 739 Gene3D Transferase(Phosphotransferase) domain 1 488 704 - -
Bisa05g0873 739 ProSiteProfiles Protein kinase domain profile. 412 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g0873 739 SMART serkin_6 412 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g0873 739 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 300 311 IPR000152 -
Bisa05g0873 739 CDD EGF_CA 284 318 - -
Bisa05g0873 739 FunFam Fibrillin 2 283 322 - -
Bisa05g0873 739 Pfam Calcium-binding EGF domain 284 319 IPR001881 GO:0005509
Bisa05g0873 739 FunFam Wall-associated receptor kinase 2 235 282 - -
Bisa05g0873 739 ProSitePatterns Calcium-binding EGF-like domain signature. 284 309 IPR018097 GO:0005509
Bisa05g0873 739 CDD STKc_IRAK 418 685 - -
Bisa05g0873 739 Gene3D Plasmodium vivax P25 domain 226 333 - -
Bisa05g0873 739 FunFam Wall-associated receptor kinase 2 382 487 - -
Bisa05g0873 739 SMART egfca_6 284 327 IPR001881 GO:0005509
Bisa05g0873 739 SMART egf_5 287 327 IPR000742 -
Bisa05g0873 739 SMART egf_5 236 283 IPR000742 -
Bisa05g0873 739 ProSiteProfiles EGF-like domain profile. 284 321 IPR000742 -
Bisa05g0873 739 FunFam Wall-associated receptor kinase 2 488 705 - -
Bisa05g0873 739 Gene3D Phosphorylase Kinase; domain 1 383 487 - -
Bisa05g0873 739 Pfam Wall-associated receptor kinase galacturonan-binding 29 88 IPR025287 GO:0030247
Bisa05g0873 739 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 22 686 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0873 Bisa-ChrBisa05 14554745 14557216 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0873 9 739 Receptor kinase-like Gene Family AT1G21230 46.988 0.0 619
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Bisa05g0873 Pkinase 1.7e-49 CL0016