Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0859 ATGGAGGATTCTGTCACAACTGGTTCAGCAGGTGACCACGACTCCAAGACCAATTGTCCCCGAGGTCACTGGAGACCCGCCGAAGATGAAAAACTCCGCCAACTCGTCCAACAATATGGTGCCCAGAACTGGAATTCAATTGCTGAAAAGCTCCAAGGAAGATCAGGGAAGAGTTGCAGATTGAGGTGGTTTAACCAGCTTGATCCGAGGATTAACAGGAGGCCATTTACAGAAGAAGAGGAAGAGAGGCTGCTTGCGGCTCATCGCATTCATGGGAACAAGTGGGCACTGATAGCGAGGCTTTTCCCAGGTCGAACCGATAACGCTGTGAAGAATCACTGGCATGTTATTATGGCGCGAAAGCAACGAGAGCAATCCAAGCTAAGTGGGAAGAGGGTCTTCCAAGACGTTTACAATGATTCTTCTAGTTATAACACTTGCTCGAATTCCGACAAGAGACCGAAATCTCAAGACCTATATAGCTCCACCCCGACATTCTTTGACTTCCGAAACCTCGACAAGAATAGGACCGTTTCTGAATATTCTCCCTCCGGCTCTTTGGCTTCTTGGAACTTCGCATCAAAAGATGGCAGAGATAATAACAACAATAATAGTTACTTCAATTCATGCTTCAACATTTACTTCTCGGACTGCTCAATCAAAAGTAACGACAGGTTTCTCTGCAGAATCTATCCAAATCCTTCGTCATCCTACGGCAGCATTAATCTAGCGAGCCACAGGAAGGTGGTTCTTCCTCCAAGTGCTTATGGATCATCGGTCCTAGGTTGTGGCGGTGATGATGGGAAGAATAGGATGGTGATGATGAAGAAGGACTTGGTCGGTTTGCGTGATAACTCAGCCACATTTGGAAACATGAGTGCTTCTACGGAACAAGAGCAAGCAGATGAACGCAAACAAGTTCCTTTCATTGATTTTCTGGGCGTCGGGGTCTCATCATCGTAA 963 0.4652 MEDSVTTGSAGDHDSKTNCPRGHWRPAEDEKLRQLVQQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQSKLSGKRVFQDVYNDSSSYNTCSNSDKRPKSQDLYSSTPTFFDFRNLDKNRTVSEYSPSGSLASWNFASKDGRDNNNNNSYFNSCFNIYFSDCSIKSNDRFLCRIYPNPSSSYGSINLASHRKVVLPPSAYGSSVLGCGGDDGKNRMVMMKKDLVGLRDNSATFGNMSASTEQEQADERKQVPFIDFLGVGVSSS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0859 320 ProSiteProfiles Myb-like domain profile. 16 67 IPR001005 -
Bisa05g0859 320 Pfam Myb-like DNA-binding domain 24 84 - -
Bisa05g0859 320 Gene3D - 21 72 - -
Bisa05g0859 320 FunFam MYB transcription factor 21 72 - -
Bisa05g0859 320 PANTHER MYB PROTEIN-RELATED 21 156 - -
Bisa05g0859 320 MobiDBLite consensus disorder prediction 1 24 - -
Bisa05g0859 320 FunFam MYB transcription factor 74 146 - -
Bisa05g0859 320 CDD SANT 84 115 IPR001005 -
Bisa05g0859 320 CDD SANT 24 65 IPR001005 -
Bisa05g0859 320 SUPERFAMILY Homeodomain-like 19 114 IPR009057 -
Bisa05g0859 320 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 67 IPR017930 -
Bisa05g0859 320 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 122 IPR017930 -
Bisa05g0859 320 Gene3D - 75 135 - -
Bisa05g0859 320 ProSiteProfiles Myb-like domain profile. 68 118 IPR001005 -
Bisa05g0859 320 SMART sant 72 120 IPR001005 -
Bisa05g0859 320 SMART sant 20 69 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0859 Bisa-ChrBisa05 14333509 14334773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0859 19 136 MYB Transcription Factor Family AT1G17950 78.814 2.70e-67 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa05g0859 Myb_DNA-bind_6 1.8e-17 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g0995 09 14545838 14547153 Bisa05g0859 05 14333509 14334773 CCT
Bisa05g0859 05 14333509 14334773 Bisa05g0859 05 14333509 14334773 ECH