Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0820 ATGTACCAGAGATGTCAAGGCTTTGAGATATCAGTGGGAGGCACTAGTGTCAGAAAAGATGCTAAGTATGTGAGAGATGGATATCAGTGGAGAAAATACGACCAGAAGGTGACCAGAGACGACCCTTCTCCTAGAGCTTACTTCAGGTGTTCCTTTGTCCCATCCTGCCTTGTGAAAAAGAAGGTTTTTAAAAGTGGCCCACTTTTCATATCTTCTAAAGATGCATGGATTGCTGTAAAGAGTCCATGCAACTTACATCTGGGATCAACATGGGAATGGAAATCTAGAAATTCACCACCAAATGTCTCTACTAATGAAGTTTCAAAAGCTCTTCTAAAGCTTCTGCCTAAGGCATCTGTCATTGATCTTGGTATAAAGGATTGGGTTTTCATTGGAACAAGAGCTAGTCTATGA 414 0.4106 MYQRCQGFEISVGGTSVRKDAKYVRDGYQWRKYDQKVTRDDPSPRAYFRCSFVPSCLVKKKVFKSGPLFISSKDAWIAVKSPCNLHLGSTWEWKSRNSPPNVSTNEVSKALLKLLPKASVIDLGIKDWVFIGTRASL 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0820 137 SMART WRKY_cls 24 72 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa05g0820 137 SUPERFAMILY WRKY DNA-binding domain 19 63 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa05g0820 137 Gene3D WRKY domain 14 70 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa05g0820 137 ProSiteProfiles WRKY domain profile. 19 65 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa05g0820 137 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 16 64 IPR044810 GO:0003700
Bisa05g0820 137 Pfam WRKY DNA -binding domain 26 64 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0820 Bisa-ChrBisa05 13728949 13738572 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0820 24 70 WRKY Transcription Factor Family AT2G25000 75.510 2.43e-21 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa05g0820 WRKY 4.7e-13 CL0274