Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0798 ATGGCTATCCGGGTTACTTTGAGCTATTCTAGCTATCTCGCCCAAAGCCTGGTGTCGTCGGCCGGTATTCTAGTCGGGACTACACGTTGCTTCCAAGAATGCTGGATTCGTTCTCGCATATTCTATCCTGGCCAACAGAAAACTGATATTGATCCCTCCGGTGCCGTGCGTACTTACCATTCCGGTTTTACGCAGCCCAAGTCGAATTGCTGGACAAAGCCTTCAGCCTCTACGTATACGACTATTGCCGAAGGGATTCTGGGTGATAATTGTAACAACCCTATCTTATTGGGTTTGATTTCGATGTTGAAGCCAGCGGTTGGTGTATCCGATTCAACTGCTGCCCGTACGGTTGTATGTGGTATTTCCCCGTTCAGGGCCTCTTCGATTATACCATTTTTACAGGGGTCGAAGTGGCTTCCGTGTAACCAGTCGATACCTGTTCCTACAAGCTGTATGGTGGATAAAGTTGGAACACAGTGTTTTGGTAGGGTTGTTAATGAGGAGTCGGGTTACAGTTCGAAGGATTTGGAGAAGACAAGTTGGCTTTCGCGCTTATTACGCATCTCTTCAGAGGATGCGAAAGCTGTTTTTACTGCTTTGACTGTTAGTTTGCTTTTCCGGTCGTCCTTGGCTGAACCGAGATCGATTCCCTCGTCTTCTATGTACCCAACTTTGGATGTGGGTGACCGTATTTTAGCGGAGAAGGTTTCCTTCTTATTTAGAAAGCCTGATGTTTCAGATATAGTGATTTTTAAGGCGCCGCCCATTTTACAGGAAATTGGATTTGGTTCAGCTGATGTATTTATAAAAAGAATCGTGGCAAAGGCTGGGGACTGTGTTGAGGTTCGTGATGGAAAACTACTGGTGAATGGCATATCTCAAGAGGAAGAATTTGTTTTGGAGCCACTCGCTTATGAGATGGATCCACTGGTCGTGCCTGAAGATTATGTCTTTGTGATGGGAGACAACCGCAATAACAGCTTTGATTCACATAACTGGGGTCCGCTTCCTATCAAGAACATAGTTGGTAGATCCATGTTTCGGTACTGGCCTCCATCCAAATTATCTGACACTGCTTATAAATCACCTTCTGCAAAGAACTATATTGCAATTTCTTGA 1122 0.4519 MAIRVTLSYSSYLAQSLVSSAGILVGTTRCFQECWIRSRIFYPGQQKTDIDPSGAVRTYHSGFTQPKSNCWTKPSASTYTTIAEGILGDNCNNPILLGLISMLKPAVGVSDSTAARTVVCGISPFRASSIIPFLQGSKWLPCNQSIPVPTSCMVDKVGTQCFGRVVNEESGYSSKDLEKTSWLSRLLRISSEDAKAVFTALTVSLLFRSSLAEPRSIPSSSMYPTLDVGDRILAEKVSFLFRKPDVSDIVIFKAPPILQEIGFGSADVFIKRIVAKAGDCVEVRDGKLLVNGISQEEEFVLEPLAYEMDPLVVPEDYVFVMGDNRNNSFDSHNWGPLPIKNIVGRSMFRYWPPSKLSDTAYKSPSAKNYIAIS 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0798 373 Gene3D Umud Fragment, subunit A 207 363 - -
Bisa05g0798 373 ProSitePatterns Signal peptidases I signature 3. 318 331 IPR019758 GO:0004252|GO:0016020
Bisa05g0798 373 ProSitePatterns Signal peptidases I serine active site. 219 226 IPR019756 GO:0004252|GO:0016020
Bisa05g0798 373 PANTHER SIGNAL PEPTIDASE I 157 358 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bisa05g0798 373 Pfam Signal peptidase, peptidase S26 194 351 IPR019533 GO:0004252|GO:0006465
Bisa05g0798 373 PRINTS Bacterial leader peptidase 1 (S26A) family signature 210 226 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bisa05g0798 373 PRINTS Bacterial leader peptidase 1 (S26A) family signature 313 332 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bisa05g0798 373 PRINTS Bacterial leader peptidase 1 (S26A) family signature 269 281 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bisa05g0798 373 FunFam Peptidase/ serine-type peptidase 219 350 - -
Bisa05g0798 373 NCBIfam signal peptidase I 196 352 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bisa05g0798 373 CDD S26_SPase_I 213 345 IPR019533 GO:0004252|GO:0006465
Bisa05g0798 373 SUPERFAMILY LexA/Signal peptidase 208 357 IPR036286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0798 Bisa-ChrBisa05 13350377 13352683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0798 222 352 MADS-box Gene Family AT1G29960 33.835 2.24e-14 67.4