Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0796 ATGGAAGAAGTCAATGTCCCTTCTAATTTTGGTGTTGAATGTGCTTCACCTGAGAAACCTGAACATGATGACAGTTTCAGAGTGCCAGCAGCTGCCCGTTCTAAAACTAGTGGTAAAAAGAATTGCAATGCTGGTTTGGAATTTGTCTCCCCTGTCTCAGCAGTGCCAGCAGTTGTAATGGATGTCCAAAGTAAGCAGAAACGAAGACCCAAACGATCAAATGCAGCCAAAGCCTCAAATGCATATGGGACAGTAGTTAACTGGATTACTGATGCCGAACCTTTATCTGCGTCTGCGGGCAGAAATAAGACGAATGAGACATTATATATTTCAAACAGAAGGCCTGTCACTGAAGATGAGAAAAATAAAGCCCTCCAGTTGGCTCAAGCAGTATGTACTATTGACGATTTTTACATAGTCATGCGACCCTCACACGTATACAAGAGATTCTATGCGTCAATCCCGAGTAAGTGGATAACAGAACATCTTTCTGCAAAATCTGAAGATGTGATATTACGCACTGAAGAGAATGAATGGCCTGCCAAATTCAGCTATGAGCATGTCCGTCGTACTGGAGGACTTACTGGTGGGTGGAAACATTTTGCTCTGGACAATAACCTGGAAGAATTTGATGTTTGTGTGTTCAAACTAGCAGATCAAACCCACAAGCCGTTGCTCATGGATGTGATAATATTCCGAGTTATTGAGGAGTTTACTCCTCTGGATAAAATGAATTCTGTAGGAACACGGGGCAAAAAGGCCATCGAAGCATAA 774 0.4251 MEEVNVPSNFGVECASPEKPEHDDSFRVPAAARSKTSGKKNCNAGLEFVSPVSAVPAVVMDVQSKQKRRPKRSNAAKASNAYGTVVNWITDAEPLSASAGRNKTNETLYISNRRPVTEDEKNKALQLAQAVCTIDDFYIVMRPSHVYKRFYASIPSKWITEHLSAKSEDVILRTEENEWPAKFSYEHVRRTGGLTGGWKHFALDNNLEEFDVCVFKLADQTHKPLLMDVIIFRVIEEFTPLDKMNSVGTRGKKAIEA 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0796 257 MobiDBLite consensus disorder prediction 1 37 - -
Bisa05g0796 257 Pfam B3 DNA binding domain 137 226 IPR003340 GO:0003677
Bisa05g0796 257 SUPERFAMILY DNA-binding pseudobarrel domain 137 226 IPR015300 -
Bisa05g0796 257 CDD B3_DNA 137 233 IPR003340 GO:0003677
Bisa05g0796 257 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 41 235 IPR044837 -
Bisa05g0796 257 SMART B3_2 137 235 IPR003340 GO:0003677
Bisa05g0796 257 ProSiteProfiles B3 DNA-binding domain profile. 137 235 IPR003340 GO:0003677
Bisa05g0796 257 Gene3D - 115 237 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0796 Bisa-ChrBisa05 13323624 13325133 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0796 123 233 REM Transcription Factor Family AT4G33280 39.640 3.12e-24 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bisa05g0796 B3 4.2e-14 CL0405