Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0792 ATGAAAGCCTCGGGCTGCTTATTAACTCTATCATTCCTTCTCTTGTCAACCTTCTCAAATGCTCTTTCCAATGCTGAAGCTTCCTTCATTGCTCGTCGACAATTGCTACATCTTCGTGAGAATGAAGATGTGTCCGATAATTATGCAGAAAACTATAAGACAGATCTAGTTTTTCCCAATCCCAGACTCAAACGGGCTTATATTGCACTTCAAGCATGGAAATCGGCAATATATTCAGATCCATTGAAAACCACAAAGAATTGGGTGGGCTCAGATGTGTGTTCTTACAATGGAGTTTTTTGTGCACAGGCTCTTGATGACCAGAGTCTCACTGTTGTGGCTGGAATTGATCTTAACCACGCAGACATTGCTGGTTTCATTCCTACGGAGATTGGTCTCTTGACTGACCTTGCTTTGTTACATATAAACACAAACAGGTTTTGTGGGATTCTTCCAAAAAGCTTCTCCAAGCTAAGGCTTTTGTTCGAGCTAGATATTAGTAACAATCGCTTTGTTGGCCCATTCCCAGAGTGTATTCTGCCAATTCCAGATCTTCATTACATTGACCTCAGGTTCAACAACTTCGAGGGTGCATTGCCTGGGGAACTATTCAATAAGAAAGTCGATGCCTTGTTTTTGAACAATAATCGATTCACATCCACAATTCCTGAAAACTTGGGGAATTCTCCGGCCTCAGTAATGGTGTTCGCCAATAACCGTTTCAGTGGGTGTATTCCAGAGAGCATTGGTGGAATGCAGAATACATTAAATGAGATCATTTTCACCAACAATAATCTCACTGGGTGCTTACCTCTAGAAATCGGAAATCTTGGGAGTGTGACAATCTTTGATGTGAGTGGAAACATGTTTGGTGGTATGTTGCCTATGTCCTATGATGGTCTAAGGAATGTGGAGCAATTAACGATTTCTCACAACAAGTTCACTGGTTCCGTCCCGCAAAGTATATGTAGCTTGCCCAACTTGGTGAACTTCTCGTTTGCTGATAACTATTTCAATAGTGAGGAACAAGGTTGTGTGCCTTCTTCTAGAAAGGACGTTGTGTTCGATGATAACGGAAACTGCATACCCAATAGGCCAAATCAGAAAGAGGACAATGTTTGCACACCTGTGACAAGCAGGCCCTTTAACTGCAGCAAGGAATTACAATGTGGTCGTCCATCAGTAGTTCCTCGCGCCAATCCTCCGACCCAGAAGCCTACTCCATCAGTTTCAAGACCACAGCCACCTAGACAAGAACCTGTTAAACCATACCCTAAAATTCAGCCACCTCCGCAGCAGACTCCTAAACCACAACCTCCTCAACATGCATCATATCCTCCTAAGGAACAACCACCAAAATATCAGGCTCCTAAATCACAACCTCAACCACCAAAGTTGGAAACTCCTAAACTTCAACCTCATCCCCAACCACCAAAACAACAGTCTCCAAAACCGCATCCTCAACCACCAAAACTGGAACCTCCCCTACCTCAACCACCCAAAGAAGATGATCCTTATGATTTAGCACCTAAAGGTCCTGATCACACACACTATCGACCATCTCCACCCCATTCTTCACCACCTCTAGTTCAATCTCCACCACCCCCGGTCCACTCTCCGCCTCCACCACCACTAGTCCATTCTCCACCACCCCCACTCTACTCTCCACCTCCTCCACCCCCGGTCCACTCACCACCTCCACCAGTTCAATCTCCATCACCTCCAGTCCAGTCTGTACCAACCCCAGTTAACTCACCACCTCCACCAGTTCAATCTCCACCACCTCCAGTCCAATCTGTACCAACGCCAGTTCACTTGCCACCTCCACCAGTGCACTCTCCACCGCCTCCGGTCCAATCTGTACCAACGCCAGTTCACTTGCCACCTCCACCAGTGCACTCTCCATCGCCTCCAGTCCAATCTGTACCAACGCCAGTTCACTTGCCACCTCCACCAGTGCACTCTCCACCGCCTCCAGTCCAATCTGTACCAACGCCAGTTCACTTGCCACCTCCACCAGTGCACTCTCCACCGCCTCCAGTCCAATCTGTACCGGCCCCAGTTCACTTGCCACCTCCACCAGTTCACTCTCCACCGCCTCCGGTCCAATCTGTACCAACGCCAGTTCACTTGCCACCTCCACCAGTGCACTCTCCATCGCCTCCAGTCCAATCTGTACCAACGCCAGTTCACTTGCCACCTCCACCAGTGCACTCTCCACCGCCTCCAGTCCAATCTGTACCGGCCCCAGTTCACTTGCCACCTCCACCAGTTCACTCTCCACCGCCTCCGGTCCAATCTGTACCAACGCCAGTTCACTTGCCACCTCCACCAGTGCACTCTCCATCGCCTCCAGTCCAATCTGTACCAACGCCAGTTCACTTGCCACCTCCACCAGTGCACTCTCCACCGCCTCCAGTCCAATCTGTACCAACGCCAGTTCACTTGCCACCTCCACCAGTGCACTCTCCACCGCCTCCAGTCCAATCTGTACCAACGCCAGTTCACTTGCCACCTCCACCAGTTCATTCTCCATCACCTCCAGTCCAATCTGTACCAGCCCCAGTTCACTTGCCACCTCCACCAGTTCATTCTCCACCGCCTCGAATCCGTTCTCCACCACCTCCTGTGCACTCTCCTCCACCTCCACCAGTCCATTCTCCACCACCCCTTGTTCACTCCCCGCCGCCTCCAGTCCACTCTCCTCCGCCCCCAGTATTCTCTCCACCTCCACCAGTCTACTCTTCTCCTCTCCCTGTTCAATCTCCGCCACCACATTCCCCATCTCTTACACCTCGTCCTCCTGTTTTGCTCGCACCTCCTCCAGAAGACGATGTAATTATTCCTCCAGTTATTGGTGCTTCTTACGCATCACCACCTCCACCAGCCATCGTCGGCTACTAA 2904 0.5 MKASGCLLTLSFLLLSTFSNALSNAEASFIARRQLLHLRENEDVSDNYAENYKTDLVFPNPRLKRAYIALQAWKSAIYSDPLKTTKNWVGSDVCSYNGVFCAQALDDQSLTVVAGIDLNHADIAGFIPTEIGLLTDLALLHINTNRFCGILPKSFSKLRLLFELDISNNRFVGPFPECILPIPDLHYIDLRFNNFEGALPGELFNKKVDALFLNNNRFTSTIPENLGNSPASVMVFANNRFSGCIPESIGGMQNTLNEIIFTNNNLTGCLPLEIGNLGSVTIFDVSGNMFGGMLPMSYDGLRNVEQLTISHNKFTGSVPQSICSLPNLVNFSFADNYFNSEEQGCVPSSRKDVVFDDNGNCIPNRPNQKEDNVCTPVTSRPFNCSKELQCGRPSVVPRANPPTQKPTPSVSRPQPPRQEPVKPYPKIQPPPQQTPKPQPPQHASYPPKEQPPKYQAPKSQPQPPKLETPKLQPHPQPPKQQSPKPHPQPPKLEPPLPQPPKEDDPYDLAPKGPDHTHYRPSPPHSSPPLVQSPPPPVHSPPPPPLVHSPPPPLYSPPPPPPVHSPPPPVQSPSPPVQSVPTPVNSPPPPVQSPPPPVQSVPTPVHLPPPPVHSPPPPVQSVPTPVHLPPPPVHSPSPPVQSVPTPVHLPPPPVHSPPPPVQSVPTPVHLPPPPVHSPPPPVQSVPAPVHLPPPPVHSPPPPVQSVPTPVHLPPPPVHSPSPPVQSVPTPVHLPPPPVHSPPPPVQSVPAPVHLPPPPVHSPPPPVQSVPTPVHLPPPPVHSPSPPVQSVPTPVHLPPPPVHSPPPPVQSVPTPVHLPPPPVHSPPPPVQSVPTPVHLPPPPVHSPSPPVQSVPAPVHLPPPPVHSPPPRIRSPPPPVHSPPPPPVHSPPPLVHSPPPPVHSPPPPVFSPPPPVYSSPLPVQSPPPHSPSLTPRPPVLLAPPPEDDVIIPPVIGASYASPPPPAIVGY 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0792 967 FunFam Leucine-rich repeat extensin-like protein 1 67 228 - -
Bisa05g0792 967 PRINTS Proline rich extensin signature 460 477 - -
Bisa05g0792 967 PRINTS Proline rich extensin signature 411 432 - -
Bisa05g0792 967 PRINTS Proline rich extensin signature 399 411 - -
Bisa05g0792 967 PRINTS Proline rich extensin signature 478 503 - -
Bisa05g0792 967 PRINTS Proline rich extensin signature 433 449 - -
Bisa05g0792 967 Gene3D Ribonuclease Inhibitor 66 361 IPR032675 -
Bisa05g0792 967 Pfam Leucine rich repeat N-terminal domain 69 101 IPR013210 -
Bisa05g0792 967 SUPERFAMILY L domain-like 67 343 - -
Bisa05g0792 967 MobiDBLite consensus disorder prediction 520 947 - -
Bisa05g0792 967 MobiDBLite consensus disorder prediction 385 967 - -
Bisa05g0792 967 MobiDBLite consensus disorder prediction 399 496 - -
Bisa05g0792 967 MobiDBLite consensus disorder prediction 497 518 - -
Bisa05g0792 967 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 14 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0792 Bisa-ChrBisa05 13290482 13293385 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0792 5 498 Trihelix Transcription Factor Family AT3G19020 52.364 1.09e-178 541