Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0787 ATGCACGCCATAAGCTGCATCATAATTGTATCCTCCATATACCTTTCTACATTCTCAAACGCTCTTTCTAATGCTCAAGCCTCCTTCATCGCTCGTCGACAATTGTTAACTCTTCACGAGAATGGAGATTTACCCGATGACTATGTAGAAACCTATAAAACAGATCTAGAGTTCTCCAATCCTAGGCTCAAAAGTGCTTATATAACACTTCATGCAATGAAAGCGGCCATATATTCAGACCCATTAGACACCACCAAGAATTGGGTGGGCCCAGATGTGTGTTCTTACAATGGGGTTTTTTGTGCCCAAGCTCTTGACGATCCAAAACTCACCGTTGTGGCTGGGATTGATCTTAATCATGCAGACATTGCAGGTTACATTCCTGCAGAGATCGGTTTGTTGACTGACCTTGCTTTATTACATTTAAACTCAAATAGGTTTTGTGGGATTCTTCCAAAAAGCTTCTCCAAGCTGAAGCTTTTGTTCGAGCTAGATGTTAGTAATAATCGCTTTGTCGGCCCATTCCCAATGTGTATTCTACCACTACCAAAACTTCAATACATTGACCTCAGGTACAATAACTTCGAGGGTGAATTGCCTTCGGAGCTTTTCAATATGCACATTGATGCCTTATTCTTGAACAATAATCGATTCACATCCACCATTCCTGAAAATATGGGGAACTCACCAGCCACAGTGATGGTGTTTGCCAATAACCATTTTAGTGGGTGCATTCCAGAGAGCATTGGTGGAATGGAAAATACGTTAAATGAGATCATTTTCACCAACAATAAACTCACTGGTTGCTTGCCCGTAGAAATTGGGAAGCTTGCTAGTACGACGGTTTTGGACATAAGTGAGAACAATTTTGGTGGCATCTTGCCCAAATCCTTCAATGGACTCCAAAAGTTAGAGAGTTTATCTGTTGACCACAACAAGCTTACTGGGTTTGTGCCTCAGAACATATGTAGCTTGCCCAGTTTGGGGAATTTTACATTCCGGGATAACTATTTCAATGGTGAAGAACAAGGGTGCGATCCTTCTTCTAGAAAGAATGTAGTGTTTGATGACAATGAGAATTGTATACCAAATAGGCCTAATCAGAAGGCAGCGAATGTTTGCGCTGCTGTGATAAGTAAGCCTATTGATTGTAATAAGGCTCAGTGTGGTCACCCATCAAGTCCACATGGGAAACCTCCCTCTGAGAAGCAGACTCCAAAACCACCTTCACAGGAATCTCCTCCTAAAAACGAACAACCTAAGAAACCTCCCTCTGAGAAGCAGACTCCAAAACCACCTTCACAGGAATCTCCTCCTAAAAACGAACAACCTAAGACCCCCCAACCACCCAAACAGGAACAACCTAAGCCCAAACCTCAGCCACCCAAAGATGATGACGACCTTAAAAATCAACCACCACCACAACAGCCTTCCCACTCTACACCTCCACAACCTAAGGAGGATCCGCCAAACGAGGAAACTCCTAAAGCACAACCACCCAAAGAGGAACAGCCTAAAACGGAAGCACCTCCACAACCTAAACCTCAAAAACCCAAGGACGAACCGCCTAAAAAGGAAACTCCTAAACCAACACCTCAACAACCTAAGGAAGAACCCCCTAAAAAGGAAACTCCTAAACCAACACCTCAAAAACCCAAGGAAGAACCGCCTAAAAAGGAAACTCCTAAACCTGAACCACCAAAAGCTGAAACCCCAGATGAGGATCCTAATGATTCAGGACCCAAAAAACCAGACCCTGTCCGATCTCCACCACCTTCAGTACAACCTCCTCCAGTGCCGGTCCACTCTCCACCACCCCCGGTTCCCTCTCCATCTCCTTCGGTCCAATCCCCACCTCCACCACCTCCTTCTGTCCAATCCCCACCTCCACCACCTCCTGTGCAGTCTCCTCCACCCCCGGTTCAGTCTCCACCACCACCGGTCCAATCTCCACCACCACCTGTTCAGTCTCCACCGCCCTCAGTTCAGTCCCCTCCACCTCCGGTCCAGTCTCCTCCGCTCCCACTATTCTCTCCGCCACCAACTGCCAGGTCTCCTCCTCCCCCTGTTCAGTCTTCGCCTCCACAGACTCCATCCCAGTCACCTTCTCCCCCTGTTCAGCCTTCGCCCCCACAGACTCCATCACAGTCACCTCCTCCAGAAGACGATGTAGTTCTTCCTCCAGTTTTTGGTGCTTCATATGCATCACCACCTCCACCAGCCATCGTCGGCTATTAA 2238 0.4687 MHAISCIIIVSSIYLSTFSNALSNAQASFIARRQLLTLHENGDLPDDYVETYKTDLEFSNPRLKSAYITLHAMKAAIYSDPLDTTKNWVGPDVCSYNGVFCAQALDDPKLTVVAGIDLNHADIAGYIPAEIGLLTDLALLHLNSNRFCGILPKSFSKLKLLFELDVSNNRFVGPFPMCILPLPKLQYIDLRYNNFEGELPSELFNMHIDALFLNNNRFTSTIPENMGNSPATVMVFANNHFSGCIPESIGGMENTLNEIIFTNNKLTGCLPVEIGKLASTTVLDISENNFGGILPKSFNGLQKLESLSVDHNKLTGFVPQNICSLPSLGNFTFRDNYFNGEEQGCDPSSRKNVVFDDNENCIPNRPNQKAANVCAAVISKPIDCNKAQCGHPSSPHGKPPSEKQTPKPPSQESPPKNEQPKKPPSEKQTPKPPSQESPPKNEQPKTPQPPKQEQPKPKPQPPKDDDDLKNQPPPQQPSHSTPPQPKEDPPNEETPKAQPPKEEQPKTEAPPQPKPQKPKDEPPKKETPKPTPQQPKEEPPKKETPKPTPQKPKEEPPKKETPKPEPPKAETPDEDPNDSGPKKPDPVRSPPPSVQPPPVPVHSPPPPVPSPSPSVQSPPPPPPSVQSPPPPPPVQSPPPPVQSPPPPVQSPPPPVQSPPPSVQSPPPPVQSPPLPLFSPPPTARSPPPPVQSSPPQTPSQSPSPPVQPSPPQTPSQSPPPEDDVVLPPVFGASYASPPPPAIVGY 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0787 745 MobiDBLite consensus disorder prediction 399 418 - -
Bisa05g0787 745 SUPERFAMILY L domain-like 73 343 - -
Bisa05g0787 745 PRINTS Pistil-specific extensin-like signature 600 623 IPR003882 -
Bisa05g0787 745 PRINTS Pistil-specific extensin-like signature 634 652 IPR003882 -
Bisa05g0787 745 Pfam Leucine rich repeat 281 329 IPR001611 GO:0005515
Bisa05g0787 745 Pfam Leucine rich repeat 137 195 IPR001611 GO:0005515
Bisa05g0787 745 MobiDBLite consensus disorder prediction 426 456 - -
Bisa05g0787 745 MobiDBLite consensus disorder prediction 387 745 - -
Bisa05g0787 745 MobiDBLite consensus disorder prediction 583 725 - -
Bisa05g0787 745 MobiDBLite consensus disorder prediction 513 582 - -
Bisa05g0787 745 Gene3D Ribonuclease Inhibitor 67 363 IPR032675 -
Bisa05g0787 745 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 13 535 - -
Bisa05g0787 745 MobiDBLite consensus disorder prediction 489 503 - -
Bisa05g0787 745 FunFam Leucine-rich repeat extensin-like protein 1 67 228 - -
Bisa05g0787 745 SMART LRR_typ_2 301 325 IPR003591 -
Bisa05g0787 745 SMART LRR_typ_2 134 157 IPR003591 -
Bisa05g0787 745 SMART LRR_typ_2 182 206 IPR003591 -
Bisa05g0787 745 SMART LRR_typ_2 277 300 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0787 Bisa-ChrBisa05 13266934 13269171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0787 4 547 Trihelix Transcription Factor Family AT3G19020 53.381 0.0 552