Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0761 ATGAGTTTTCAATTAGGCAATGACCAAGTCAAGAGCATTGTCCCCCAAGACATCATTGGCATGATGAGATCAATAGATCTAAGTGATTCGAAAGCAACATCTCCTCGCGATTACACAATAAGAAACTATCTTACAACAATTGCTGTCAAACACTTAAGTGCTTTAGCTCCAATCACTTGGAAGCTGGACATGAAGCGAAGAGAGCAATCCCAACCTCCTTGTCTAACAGATGTGGAGTCAGATAAACTAAGTTGCTTACCGGGTCATGTTATAGACCAAGTTCTGTCGCATTTGTCTATTCGGGAAGCAGTGAGAACAAGTGTTTTATCTAGCAAGTGGAGGTACAAATGGACTACACTACCAAATCTTGTGTTTGATAACCAGTGTCTCTCTCTATCCTCTCAAGATCATTCAATTATTAAGAACAAGCTTGTGAGAATTGTTGATCATGTACTTTTGCTTCACTCTGGTGCAATCAACAAGTTCAAGCTCTCCCATCGTGATCTTATTGGTCTGACTGACATTGATCGATGGACTCTTTATCTAACCAGAAGGTCTATCAAAGAGCTTGTGCTGGAAATCTGGAAAGGTCATCGCTACAAGATACCCTCCTGCTTATTTACTTGCCAAAGTTTAGTTCATTTGGAGTTATTTAATTGCTGGCTTAAGCCTCCATCAACATTCAAAGGCTTCAAGAACTTGAAGAGTCTTGATCTTCAGCATGTTACCTTGGATCAAGATGTGTTTGAAAACTTGATATCTAGCTGTCCTCTGCTTGAACGTCTAACACTGATGAACTTCGATGGTTTCACTCATCTCAACATCGATGCACCAAATCTTCAGTTTTTCGACATTGGAGGCAAATTTGAGGATGTTAGATTTGAGAACACTTTCAATTTAGCTGTTGTATCCATTGGTTTGTATTTGAACTTTGAAAACGAGAAAAGTAGATGGCAAGGAAATTCTAGCAATTTGCTGAAGTTTTTTGTTCATCTACCTCATGTAAGAAGGTTAGAGGTTCAAAGCTATTTTTTAAAGTATCTGGCGGTGGGGGTTGTGCCACTAAAGCTTCCTAGACCATGCACTGATCTAAGTTATCTTTCCATACGCATAAACTTCAATGATTCGAAGGAAATTTCAGCTGCTTTGTGCCTGTTAAGAAGCTCTCCAAACCTACAAGAATTGGAAGTATTGGCTCGCCCCGAGGAACAACAGACGACTCTTGGAACACTGGCCTACTGTTGGGAGGATGAATATTGGAATAGTCCAGTGATGCAACTACGATTTGCGAGGATAGACGGCATCTCTGGTATCAAACCAGAATTAGATTTTATCAGCTTTCTGCTTTCGTATTCTCCTGTTCTAGAAACGATGACTGTGAAGCCTGTTTCTTCAAATGGAGGAATAGAGTTAATGAAAGAATTATTGCGGTTCAGGCGAGCCTCAGGACAAGCTGAAATCATATACTTGGATCCTTGA 1479 0.4016 MSFQLGNDQVKSIVPQDIIGMMRSIDLSDSKATSPRDYTIRNYLTTIAVKHLSALAPITWKLDMKRREQSQPPCLTDVESDKLSCLPGHVIDQVLSHLSIREAVRTSVLSSKWRYKWTTLPNLVFDNQCLSLSSQDHSIIKNKLVRIVDHVLLLHSGAINKFKLSHRDLIGLTDIDRWTLYLTRRSIKELVLEIWKGHRYKIPSCLFTCQSLVHLELFNCWLKPPSTFKGFKNLKSLDLQHVTLDQDVFENLISSCPLLERLTLMNFDGFTHLNIDAPNLQFFDIGGKFEDVRFENTFNLAVVSIGLYLNFENEKSRWQGNSSNLLKFFVHLPHVRRLEVQSYFLKYLAVGVVPLKLPRPCTDLSYLSIRINFNDSKEISAALCLLRSSPNLQELEVLARPEEQQTTLGTLAYCWEDEYWNSPVMQLRFARIDGISGIKPELDFISFLLSYSPVLETMTVKPVSSNGGIELMKELLRFRRASGQAEIIYLDP 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0761 492 ProSiteProfiles F-box domain profile. 80 114 IPR001810 GO:0005515
Bisa05g0761 492 Pfam Leucine Rich Repeat 233 257 IPR013101 -
Bisa05g0761 492 SUPERFAMILY F-box domain 81 144 IPR036047 GO:0005515
Bisa05g0761 492 PANTHER F-BOX PROTEIN-LIKE 81 464 - -
Bisa05g0761 492 SUPERFAMILY RNI-like 172 396 - -
Bisa05g0761 492 Gene3D Ribonuclease Inhibitor 155 417 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0761 Bisa-ChrBisa05 12573161 12579220 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0761 69 313 EF-hand Containing Proteins AT5G41840 23.358 5.69e-12 65.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0761 05 12573161 12579220 Bisa05g0761 05 12573161 12579220 ECH