Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0758 ATGGGTTGGCTTAGCAAAATTTTTAAAAGCTCAGACGAGACCTCCGACCGTAAGATTTCAGAAGGGCATTATAATGCAAATTATAGAGGAGATACAGATTATTACTTGCCATCGACTTCAGGGGATGTCTGGTCAGAGAATGAGAATGAAGACATAGATCGAGCTATTGCACTATCTCTTGCAGAGGAAAATCGGATAGGAAATAACATAAATGGCCGCAATTCACAATTAGAAGAAGATGAACAACTTGCTAAAGCTATACAAGAAAGTCTTAACGTTGAGTCTCCTCCCAGATATGGAGATGGAAATGGAAATATGTATCAACCAATGCCAGTGTATTTCCCAATGGGGTCCAGGATTTGTGCTGGCTGCAATACTGAGATTGGTTACGGACGATATCTAAATTGCTTGAGTGCATTCTGGCATCCTGAATGCTTCCGCTGCCGTGCTTGCAACTTACCAATCTCTGATTATGAGTTCTCCACATCTGGGAATTACCCTTACCACAAATCATGCTATAAAGAAAACTACCATCCAAAATGTGATGTCTGCAAGCACTTTATTCCAACAAACCCTGCTGGTCTTATTGAATATAGGGCACATCCTTTCTGGATCCAGAAATATTGCCCTTCTCACGAACACGATGGTACTCCACGCTGTTGCAGCTGTGAGCGTATGGAGCCACGGGAGACGGGATATATTGCTCTTAATGATGGTCGGAGATTATGCCTGGAGTGTCTGGACTCTGCTATAATGGATACTAGCGAATGCCAACCCCTTTATACAGATATACAAAAGTTTTATGAAGGTCTAGATATGAAACTGGATCAGCAAGTTCCATTACTCTTGGTTGAAAGACAAGCATTGAATGAAGCAAGAGATGGGGAGAAGAATGGCCACTATCACATGCCTGAAACCAGGGGACTCTGCCTTTCTGAAGAACAGACTGTCAGCACAGTCTTGAGGCGACCTAGGTTTGGAACAGGCAATAGAGCAGTAGACATGAGAACACAACCCTACAAACTGACTCGACGCTGTGATGTGACAGCAATTCTCATTTTGTATGGTCTTCCAAGGTTGCTTACTGGATCGATCCTGGCTCATGAAATGATGCATGCATGGCTGCGACTGAAAGGTTATCGGACTCTGAGACAAGATGTTGAAGAAGGTATCTGTCAAGTTGTGGCTCATATGTGGTTGGAGTCCGAGTTATCTTCAGCTTCAGCCTCATCCTCATCTTCATCCTCTTATGCATCCCGCGCATCCCGTAAAGGTAAAAGACCTCAATTTGAGAGGCAGCTTGGTGAGTTCTTCAAGCACCAGATCGAGTCAGACATTTCCCCAGTATACGGGGACGGATATAGGGCAGGCCAAGTGGCAGTTCGTAAGTATGGTCTAGAAAGGACCCTTCACCATATCAGGATGACGGGGAATTTTCCCCTTTGA 1446 0.4426 MGWLSKIFKSSDETSDRKISEGHYNANYRGDTDYYLPSTSGDVWSENENEDIDRAIALSLAEENRIGNNINGRNSQLEEDEQLAKAIQESLNVESPPRYGDGNGNMYQPMPVYFPMGSRICAGCNTEIGYGRYLNCLSAFWHPECFRCRACNLPISDYEFSTSGNYPYHKSCYKENYHPKCDVCKHFIPTNPAGLIEYRAHPFWIQKYCPSHEHDGTPRCCSCERMEPRETGYIALNDGRRLCLECLDSAIMDTSECQPLYTDIQKFYEGLDMKLDQQVPLLLVERQALNEARDGEKNGHYHMPETRGLCLSEEQTVSTVLRRPRFGTGNRAVDMRTQPYKLTRRCDVTAILILYGLPRLLTGSILAHEMMHAWLRLKGYRTLRQDVEEGICQVVAHMWLESELSSASASSSSSSSYASRASRKGKRPQFERQLGEFFKHQIESDISPVYGDGYRAGQVAVRKYGLERTLHHIRMTGNFPL 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0758 481 PANTHER PROTEIN DA1-RELATED 2 3 480 IPR045218 -
Bisa05g0758 481 CDD LIM_DA1 121 173 - -
Bisa05g0758 481 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 113 146 - -
Bisa05g0758 481 ProSitePatterns LIM zinc-binding domain signature. 121 155 IPR001781 -
Bisa05g0758 481 Pfam Protein DA1 270 476 IPR022087 -
Bisa05g0758 481 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 147 201 - -
Bisa05g0758 481 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 78 97 IPR003903 -
Bisa05g0758 481 SMART uim 47 66 IPR003903 -
Bisa05g0758 481 SMART uim 78 97 IPR003903 -
Bisa05g0758 481 ProSiteProfiles LIM domain profile. 119 179 IPR001781 -
Bisa05g0758 481 Gene3D Cysteine Rich Protein 116 194 - -
Bisa05g0758 481 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 47 66 IPR003903 -
Bisa05g0758 481 Pfam LIM domain 121 175 IPR001781 -
Bisa05g0758 481 MobiDBLite consensus disorder prediction 409 428 - -
Bisa05g0758 481 SMART lim_4 120 172 IPR001781 -
Bisa05g0758 481 FunFam Protein DA1-related 1 115 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0758 Bisa-ChrBisa05 12503255 12508846 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bisa05g0758 DA1-like 9.2e-100 CL0126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0758 05 12503255 12508846 Bisa05g0758 05 12503255 12508846 ECH