Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0706 ATGGGTTGGAGGAGTTTACTCTGCAGGAATACGATCAAGATCAGGAAACTACCCAGGCTCAATGGAGCTTTACTATCTTCTCACTCTGATTTTTATAGAACTAGTTCCGCTGTCGCATTTCTTACATTTCCTTCATTTCATTCTTTTGATCACAGCTATGTCTCCGGTGTATTCCAATCACCTCAGTGCCCAAACTTCATTTCGTCCTTCTCTAGACACCTTCATTCTACTGGACTAACTAGACTCAGCAATTTGGACTATGACCCAAAAGCTACTTCGGAGGAGGAGGAGGAGGATGGAACGATGAACGAGTTCTTGTCACGATTTGTGTGGATAATGCGTAAGAAGGTCGTTGAAGCATATCCGGATTCTGATAAACAGACAGTTGATGGCATGTTACTGATCATCGTTAGCAAGGTTGTATCTGAACTGGAAAAGGGTGGGTTCGAGCAGGTTATTAATGCGTCGCCCTCTCCTTCGCCAGATTTTAGTGAGGATTTGTGGAGGACGGTATGGGAGGTAAACAATATGGTATTGGATGATATGAATAAGGAACGGAAGAAGGAAAAAATGAAGGGTTTTTTGCAGTCTGAAGAAGTGAAGGAGATGTGCAGGTTTGCTGGCGAAGTTGGTGTTCGCGGGGATTTGCTAAGAGAGCTTAGGTTCAAGTGGGCGCGCGAGAAAATGGAGGAGCATGAATTCTATGAGAGTTTGGAGCGCTTGAGGAAAGAGGCTCAAGCTGAAGAAGATGGAAAAACAAAGAGCAAGAAGGTCGATGTTGTTGAGGAGAAATCTAAGGCTATTACTCTTCCGAAGAGACGAGGAAAGATAAACTATAAGATATATGGGCTAGATCTCTCTGATCCTAAGTGGACAGAAATAGCTGACAGAATCCATGAGACGGGGGAACTCATTTGGCCCCAAGAGCCAAAACCTATACATGGGAAAAGCAAACTGATCACTGAGAGAATTCTGTCACTAAACGAGGGGGATGACCCGACTCCGCTGATAGCTGAGTGGGTAGAGACTCTCCAACCTAACAGGGCTGACTGGACTAATTTACTTGACAAATTGAAGGAGCGGAATACCCCTATATACTTAAAGGTAGCTGAAATTGCATTGACAGAAAAGTCTTTCGAAACAAATATCCTTGACTATACTAAGCTTATATGTACCTATGCCGAAGACAGCAAGATTGATGATGCTGAGAGGATCCTTAAGAAGATGAACGAAAATGGTTATCTAAAAGATGCTATAACTGCCAGTGCATTGGTTCACATGTATACCAAGGCAGGCAATTTTGAAAGTGCAAAAAAAGCATTTGAAGACTTGAAAAGCCAGGGTGTCCAACCAGACTTGAAAATCTATAACTCAATGATCATGGCTTATGTAAACGCTGGCCAACCTAAGATGGGTGAGGCTCTAGTGAGGGAACTGGAGACAGGAGAAATCCAACCCACTTATGAAATATACACCGCACTGCTTCGATCTTTTGCTCAGCTTGGTGATGTTAGTGGGGTTGTACGTATTTCAACAGCTATGCAGTTTGCTGGGTATCAGCCTACCATGGAGAGTTGTTCATTGTTTGTTGATGCCTATGCACAAGCAGACGACCCGGATCTGGCAAGAAACAGCTTTGACTACATGATAAAACTTGGATTTAGGCCTGATGATAGGGTCACTGCTAGTATGATTGCAGCTTATGAGAAGAAGAATTTATTGGATAAGGCATTAAATCTTCTTTTGGAGCTAGAGAAGGATGGCTTTGAGCCTGGGATTGCCACTTATACTGTTCTTGTGGACTGGTTAGCAAAGATGCATCTTGTTGAAGAGGCCGAGCAGCTTTTAGGGAAAATTGCTCAGCTGGGTGAGACTCCTCCTTTTAAGATTCAGGTGAGTCTTTGTGATATGTATGCAAGGGCTGGAAATGAGAAAAAGGCCCTTCAAGCTCTAGGAGTTCTTGAGGCTAGGAAAGTTGAATTACGACCAGATGAGTTTGATAGAATCATAAAAAGTCTTTCTGCTGGTGGCTTTGAGCAGGATGCACGAAGAATACAAGGTATCAAGGAGGCAATGGGATTTACTGTAACTGAGCCATCTAAAACGGCCATCAATAATTCTTATTTTATTCGTGGCGGAGGAGGACCAAGTATGAGATAG 2160 0.4315 MGWRSLLCRNTIKIRKLPRLNGALLSSHSDFYRTSSAVAFLTFPSFHSFDHSYVSGVFQSPQCPNFISSFSRHLHSTGLTRLSNLDYDPKATSEEEEEDGTMNEFLSRFVWIMRKKVVEAYPDSDKQTVDGMLLIIVSKVVSELEKGGFEQVINASPSPSPDFSEDLWRTVWEVNNMVLDDMNKERKKEKMKGFLQSEEVKEMCRFAGEVGVRGDLLRELRFKWAREKMEEHEFYESLERLRKEAQAEEDGKTKSKKVDVVEEKSKAITLPKRRGKINYKIYGLDLSDPKWTEIADRIHETGELIWPQEPKPIHGKSKLITERILSLNEGDDPTPLIAEWVETLQPNRADWTNLLDKLKERNTPIYLKVAEIALTEKSFETNILDYTKLICTYAEDSKIDDAERILKKMNENGYLKDAITASALVHMYTKAGNFESAKKAFEDLKSQGVQPDLKIYNSMIMAYVNAGQPKMGEALVRELETGEIQPTYEIYTALLRSFAQLGDVSGVVRISTAMQFAGYQPTMESCSLFVDAYAQADDPDLARNSFDYMIKLGFRPDDRVTASMIAAYEKKNLLDKALNLLLELEKDGFEPGIATYTVLVDWLAKMHLVEEAEQLLGKIAQLGETPPFKIQVSLCDMYARAGNEKKALQALGVLEARKVELRPDEFDRIIKSLSAGGFEQDARRIQGIKEAMGFTVTEPSKTAINNSYFIRGGGGPSMR 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0706 719 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 452 486 IPR002885 -
Bisa05g0706 719 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 417 451 IPR002885 -
Bisa05g0706 719 PANTHER OS07G0661900 PROTEIN 112 702 - -
Bisa05g0706 719 Pfam PPR repeat 525 554 IPR002885 -
Bisa05g0706 719 Pfam PPR repeat 595 622 IPR002885 -
Bisa05g0706 719 Pfam PPR repeat 563 589 IPR002885 -
Bisa05g0706 719 Gene3D Tetratricopeptide repeat domain 353 502 IPR011990 GO:0005515
Bisa05g0706 719 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 557 591 IPR002885 -
Bisa05g0706 719 NCBIfam pentatricopeptide repeat 420 452 IPR002885 -
Bisa05g0706 719 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 522 556 IPR002885 -
Bisa05g0706 719 Pfam Pentacotripeptide-repeat region of PRORP 395 505 IPR033443 -
Bisa05g0706 719 Gene3D Tetratricopeptide repeat domain 503 704 IPR011990 GO:0005515
Bisa05g0706 719 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 382 416 IPR002885 -
Bisa05g0706 719 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 592 626 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0706 Bisa-ChrBisa05 11605581 11608918 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0706 382 712 Glycosyltransferase AT1G05670 23.653 1.31e-24 107
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0706 05 11605581 11608918 Bisa05g0706 05 11605581 11608918 ECH