Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0672 ATGATGTGGAATACGGAATCTTGTGAAAAATGTAACAAGTACGACGTGGATGTGTTGGCTTATCTTTCTTATCGCACATTGCATGCTTCAATTTTCAAACAAGTTCTGGTCTTCATTTTGCAAGCTGGCAAGAACAGCTTGTTCCTGACCAAGAATATCCTGGTTACAAGACTCATCCTCAAATCCCCCCTCCAAGTATCTTACAAACTCATAATGTCAAACCAATTTGATAACCAAAATTTTGACGCTTATGGTTCTTCCTTAAGAAGCAGCGACGCCAACGCATATCCTGAGGCCTTTGTAGTATTCCCAGGCATCCAAGCTCCTGCACTACCAGAGAATTCTGAGATCAGTCACACTAGACATTTCATGGATCTTCTTGGAGCAGCTAATGAGAGCAATCACCGCCAACCTCAGCCTCAGGGTCTCTCTCTTTCTTTAGGATCTCATATGCTTGTCCATTCTGAAGATTACAGGCAGCCCTCCTTGAATCAGGGTCTTGTGAGCCCCAATTACTTCATATCTGGAGAAGAATCAAGGGAAGCTTGTAATCCAGGAGTGGATCATTTAGCCAGTGACTATTCTTTCACCAACACCACTTTTGCTTCATCTTCTACCTCGTTAACCCACTCTCTTTCCACTTCTTATGCTGCTATAATTGGGAACTCAAGATACCTGAGACCAGTGCAATCCCTTCTTGAAGAGCTTGTTGATGTTGGTGGAAATGTGATTGACAGAATCAATGAGAAGTATGTGGAGAAGCTGTTTCGCGGAGGTAAAACAGGAGGTAGGAGACTTTCCTCAGAGTTGAGAGCAGAGTTGTGCAATAATGGGTTTTTATTGGCTGAGAAACATGAACTTCATGTAAAAATTGCCAAGTTGATTGCTTTGTTAGATGAGGTAGAGGGTAGATATGAGAAATACTACCATCAAATGGAAGAAGTGATGTCTTCCTTTGAAATGATAGCAGGTCCAGGATCTGCCAAGTGTTATACTGCATTGGCACTCCAGGCCATGTCTAGGCATTTCTGCAACTTGAGAGATGCCATAGTGTCACAAATCAATGTGGAGAAAAGGAAACTCTTGCAAGAGTTACCTAGAATCAGCAACCAGTTATCTCAATTAAGCTTGTTTGACAGAGATAGGAGACAAAATAGAACCTCTCTCCAGAGGCTTGGGTTTATCCAAAGCCAACGACAAGTATGGAGACCCATCAGAGGATTGCCTGAAACTTCTGTTGCAATCCTTCGTTCTTGGCTTTTTGAACACTTCCTCCACCCTTATCCTAATGATTCTGAAAAGCTTATGCTGGCATCCCAGATAGGTTTGACTAAAAACCAAGTCTCAAATTGGTTCATAAATGCTCGAGTACGCCTATGGAAACCAATGATAGAAGAGATGTACAGAGAGGAGTTTGGAGATTCTTCAGAAGACTCCAATCCCCCTGGTAACACCACAGACCGCGTGGAGGATTAA 1476 0.4262 MMWNTESCEKCNKYDVDVLAYLSYRTLHASIFKQVLVFILQAGKNSLFLTKNILVTRLILKSPLQVSYKLIMSNQFDNQNFDAYGSSLRSSDANAYPEAFVVFPGIQAPALPENSEISHTRHFMDLLGAANESNHRQPQPQGLSLSLGSHMLVHSEDYRQPSLNQGLVSPNYFISGEESREACNPGVDHLASDYSFTNTTFASSSTSLTHSLSTSYAAIIGNSRYLRPVQSLLEELVDVGGNVIDRINEKYVEKLFRGGKTGGRRLSSELRAELCNNGFLLAEKHELHVKIAKLIALLDEVEGRYEKYYHQMEEVMSSFEMIAGPGSAKCYTALALQAMSRHFCNLRDAIVSQINVEKRKLLQELPRISNQLSQLSLFDRDRRQNRTSLQRLGFIQSQRQVWRPIRGLPETSVAILRSWLFEHFLHPYPNDSEKLMLASQIGLTKNQVSNWFINARVRLWKPMIEEMYREEFGDSSEDSNPPGNTTDRVED 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0672 491 ProSiteProfiles 'Homeobox' domain profile. 421 462 IPR001356 GO:0003677
Bisa05g0672 491 MobiDBLite consensus disorder prediction 471 491 - -
Bisa05g0672 491 Gene3D - 396 477 - -
Bisa05g0672 491 SUPERFAMILY Homeodomain-like 408 470 IPR009057 -
Bisa05g0672 491 Pfam Homeobox KN domain 419 458 IPR008422 GO:0003677|GO:0006355
Bisa05g0672 491 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 147 479 - -
Bisa05g0672 491 Pfam Associated with HOX 220 351 IPR006563 -
Bisa05g0672 491 SMART prehox3 214 352 IPR006563 -
Bisa05g0672 491 CDD homeodomain 402 463 IPR001356 GO:0003677
Bisa05g0672 491 SMART HOX_1 402 466 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0672 Bisa-ChrBisa05 11065422 11068861 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0672 141 477 Homeobox Transcription Factor Family AT1G19700 43.855 1.04e-81 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Bisa05g0672 POX 1.5e-38 No_clan