Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0671 ATGTTATCTGGGAATCATCTTTTACCTCATAGCTACACTGAATCTGTAGGCGGCCAAAACGAAGTCAAGTTCATCACAGCCATAGGTGACACCATGACCATGCAGCCTCTTGATGGGCATTCCAACACTGCAACAAATGATCCATCTGGCACCTCCTTCACAAGGACTCAAATGGGACTTGTTGATGGTGACCAAAACATACAGAGCCAGGGTTTATCTCTCAGCCTTGGCACATTCATGCCTCCTTCTGTATCTGTCCCTCCCTTCCAATACCACTATCCCTCCTCTGGTTTTTCATCGCTAATGACCACTTGTCTTCCAAACTTAAAGGGCACTGTTACTCTTAAAGACGACGAGGCTAGTGCTGAATGCATGGCATCCATATCTTCTGGAGGTTTTCATAATTCTATCCAAAAGGAGGCTTTGTACAATGATCCATGTCTGCACGGATCACAAGGCTTTTCAAATGCTATCCTAAACTCGCATTACCTTAAAGCAGCACAGGAATTGCTTGATGAAATAGTTAATGTCCGAAAGGCTTTAAAGCAATCTGGAATGGAGAAACAAAAGAGTCTGCGTGACATGGGATTAGATGGCTCTAAAGATTCAGAGGAGAAATCTGCCAGTCAATCAATGCAAATGTCTTCAGACCCTAATGCTTCATCTGCAAACACTTCCTCTGAGTTATCACCCGCAGAACGGCAGAATCTGTTAGACAAGAAGACAAAACTTCTGTCTATGTTAGACGAGGTCGATAAAAGATACCGACAGTACTGTCATCAGATGCAAATTGTGGTGTCATCTTTCGATATGGTTGCTGGGTGTGGAGCAGCAGAACCGTACACTGCACTTGCTCTGAGAACAATCTCTCGCCATTTTCGCTGTTTGCGTGATGCTATCAGTGGCCAAATTCAAGTGACTCAGAGGAGCCTTGGTGAGCAAGAAGGAATACCTCGTCTTCGATATGTTGACCAGCAGCTTAGACAACAAAAGGCCCTTCAGCAGCTTGGCGTTATGCGACAAGCTTGGAGGCCTCAGAGGGGACTTCCTGAAAGCTCTGTTTCAATTCTTCGTGCTTGGCTATTTGAGCATTTCCTTCATCCGTATCCAAAGGATTCAGAGAAAATTATGCTGGCAAGGCAAACAGGCTTGACTAGAAACCAGGTAGCAAACTGGTTCATTAATGCTCGGGTGCGACTTTGGAAGCCAATGGTGGAGGAAATGTACAAAGAAGAGTTTGGTGATTCTGAAATGATGAGCTGCAATCTCTCCTCGGAAGGCACTCCTAAAGTTCCAAGAGATAATAGCGTTCAAATGTCAGATAAAAAAGGAGAAGAATCGCAGGACAATTTAAAAACTGCTAATGCCACTGTCCAACAGGGGCAATTTCATGAGTTGAAATTGGACCATAGCTCCACTTCAGAATATGATACTGCTCATGGAGAAACTGTCATGCATTCTGGCATAACAAAACTGCAGGGTGATCAAAGGCCTAATATGAACAATAACCTTTATTCAACCAACCACAATGGCGGTGATGCCTGCCTCTTGCCTCCTCCTCCGGCCTCCTATGACTTATCGGAGTTGGGCAGTTTTCCGGTGGGTGGCCACGTGTCACTTGCATTGGAGTTGCGCAACTGTGAAACCGATGAATTTGCCATGTCTGGTAGCGGCCTCAACAAACGACGTAATCAGACTTTAGATTCTTCCCCGGAGACTGATTTGATAGACTATCATTTCACAGACCCAGGAAAGCAACAGAACAGGTTTAGCAATCCTCATCTATTGCATGAGTTTGTCGTCTAA 1806 0.4485 MLSGNHLLPHSYTESVGGQNEVKFITAIGDTMTMQPLDGHSNTATNDPSGTSFTRTQMGLVDGDQNIQSQGLSLSLGTFMPPSVSVPPFQYHYPSSGFSSLMTTCLPNLKGTVTLKDDEASAECMASISSGGFHNSIQKEALYNDPCLHGSQGFSNAILNSHYLKAAQELLDEIVNVRKALKQSGMEKQKSLRDMGLDGSKDSEEKSASQSMQMSSDPNASSANTSSELSPAERQNLLDKKTKLLSMLDEVDKRYRQYCHQMQIVVSSFDMVAGCGAAEPYTALALRTISRHFRCLRDAISGQIQVTQRSLGEQEGIPRLRYVDQQLRQQKALQQLGVMRQAWRPQRGLPESSVSILRAWLFEHFLHPYPKDSEKIMLARQTGLTRNQVANWFINARVRLWKPMVEEMYKEEFGDSEMMSCNLSSEGTPKVPRDNSVQMSDKKGEESQDNLKTANATVQQGQFHELKLDHSSTSEYDTAHGETVMHSGITKLQGDQRPNMNNNLYSTNHNGGDACLLPPPPASYDLSELGSFPVGGHVSLALELRNCETDEFAMSGSGLNKRRNQTLDSSPETDLIDYHFTDPGKQQNRFSNPHLLHEFVV 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0671 601 SMART prehox3 152 302 IPR006563 -
Bisa05g0671 601 MobiDBLite consensus disorder prediction 183 205 - -
Bisa05g0671 601 SMART HOX_1 343 407 IPR001356 GO:0003677
Bisa05g0671 601 MobiDBLite consensus disorder prediction 420 449 - -
Bisa05g0671 601 MobiDBLite consensus disorder prediction 182 235 - -
Bisa05g0671 601 Pfam Homeobox KN domain 360 399 IPR008422 GO:0003677|GO:0006355
Bisa05g0671 601 CDD homeodomain 343 404 IPR001356 GO:0003677
Bisa05g0671 601 ProSiteProfiles 'Homeobox' domain profile. 340 403 IPR001356 GO:0003677
Bisa05g0671 601 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 85 440 - -
Bisa05g0671 601 MobiDBLite consensus disorder prediction 206 233 - -
Bisa05g0671 601 Pfam Associated with HOX 158 301 IPR006563 -
Bisa05g0671 601 Coils Coil 164 184 - -
Bisa05g0671 601 Gene3D - 340 417 - -
Bisa05g0671 601 MobiDBLite consensus disorder prediction 420 435 - -
Bisa05g0671 601 SUPERFAMILY Homeodomain-like 344 411 IPR009057 -
Bisa05g0671 601 FunFam BEL1-like homeodomain protein 4 346 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0671 Bisa-ChrBisa05 11061957 11065175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0671 19 426 Homeobox Transcription Factor Family AT1G19700 50.234 3.46e-120 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Bisa05g0671 POX 2.7e-51 No_clan