Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0666 ATGTCTGGAAGTTCTGTCAAGTATGATTTGCTTTTCCTCAGTTCCACTTGTTGTGAACCCTATTCCACGCACAAGGGACACGTAGAAAGTAGAAAGTCAGACAAGTTGAAGGACGTGTTTCGCAAAACTACAGAGTCAGACAGTGGCGGTGTGAATTGGATTGGATTGGATCCCCGTTACTCTTGGTCCCAGACCTGTCGCTGCCCCAGACGGATCGGGTCGTCTCCCTCATTCGGGTCTATCCAACCCACCCGCAACCTGCTCACTACCTTTTCCTCCACACAACCAGCAAGGAATCTTTCTTTCTCTGCCGCCTGGGAGTATCCCGACCCTCCCCCATCGACACCCCGCGTCTTCCCTTCATTGATCATGGACGTCGAACCCCGCCAATACGAAAACCTTGCCATAAATGATAATGACATCCACAACATAGTTCTGTCATATCTTATTCATAATTGCTACAAAGAATCTGTGGAGTCATTTATTGCTTGCACTGGGATGAAGCAGCCAGCAGATTATTTGGAGGACATGGAAAAAAGGAAGAGAATTTTTCATTTTGCATTAGAAGGAAATGCACTGAAGGCCATTGAGCTGACTGAGCAGCTGGCACAGGATATTCTTGAGATGAATAAGGATTTGCGCTTTGATCTTTTGAGCCTTCATTTTGTAAAGCTTGTCTGCTCTAGGAAATGCACAGAAGCTTTGGAGTTTGCTCAGACCCAGTTGAGCCCTTTCGGGAAGGAGCAAAAGTACATTGAAAAGCTTGAGGACTTTATGGCCCTTCTTGCCTATAAAGAACCAGAGAAATCCCCAATGTTTCATCTGCTTAGCTTAGAGTACCGGCAGCAGGTTGCAGATAGTTTAAATCGAGCTATTCTTGCACACTCAAACCTTCCCGGCTACACAGCAATGGAGAGGCTTATACAGCAGGCCACGGTAGTTAGGCAATGCTTAAGTCAAGAGGCTGGCAAGGATGGTCCTCCACCTTTTTCATTGAAGGATTTCCTCAAAAAGTCAGATACTCGTATACTGGTCTCCCTCTCTCCCTATCCATCCGTCACGAGAACTGGTGATCGGACACGGATAATGGTGTCTCTACTTCCTGCACCATCGTCGCCTTCATTTTCTAGCATTCGTTTTCGTGAAACTTACCTGTTCTCCACTCGCTTGCTTCCACCAAGGAGTAATCAACAAGGATGCAACTCTGGAAATTTTAGATGGTATACGGTTAAGTGCAGACTTCTCAGCGGCAATGTGTCTCCTTCATCAAGCCCTTCTACAGTGATCAAGGAACCTCACAAGTATTTTGATCAGGCAATCATCACAGTTCGTTCAGGTGATGGAGGCCATGGAGCAATACTTAGTATGCCCAACCAGAGAGTTAATAGTTCACAAGGAAAACAAGAAAAGCAAAAGACAAGGAAGACAAGCTCCTTTAGAAGGGACTTTGATGGATCGCTTATCCTACCTACAGGTGGGCTGGGAGGAGATGTGGTTATTTATGCGGATGAAGAAAAAGATTCATTATTGGAATTCCACAAGAAAAGCCGCTATAATGCAAAGCGTGGTGGCAATGTTGCTGCAATGGGCGTTTTGACCTCACAATTGCGTGATGGACTTGCTGCTCCAACTTTGCGCATTCCCGTGCCTGTAGGTACAGTTGTAAAACGCAAACGAGGGAAATTGTTGGCTGATCTGGCACGGCCAGGTGATGAAATTCTTGTTGTGAGGGGTGGACAAGGAGGGATTAGCTTGTTAGAAATGCCACAGCATAGAAGGAAAAAGATGATGTCTTTGACAACAAATGTGATGAGAGATGACACTGATAAGGTTTTATCTTTCGGTCAACCAGGCCAGGAAGTTAGTTTGGAGTTGATCCTACGAGTTGTTGCTGATGTTGGGCTAGTTGGACTTCCAAATGCTGGGAAATCAACACTTCTGGCAGCCATTACACTTGCAAAACCTGATATTGCTGATTATCCTTTCACAACATTAATGCCAAACCTGGGGCGACTTGGTGGTGACCCTAGCTTGGGGGCAGCAATGTATTCGTCTGAAGCTACATTAGCAGATCTGCCTGGTCTTATTGAAGGTGCTCACTTAGGAAAGGGTCTTGGTCGCAATTTTTTGAGGCACCTCAGGAGGACCCGGCTTCTAGTCCATGTTGTTGATGCAGCAGCTGAGAACCCTGTAAATGACTATAGAACTGTCAGGGAGGAGTTGCGCATGTATAATCCTGAGTACCTTGAACGACCATACATTGTTGTTTTAAATAAGATTGACCTCCCAGAGGCCAAAGACAGGCTTCCACCATTGACTGAAGAAATCCTGAGAATTGGGACCGTCAGCTCACCTTCTGAACCCAACTTGAGCTCAGAAGATCCAGATCAATCATCATACAATGAAGGTGACATAAGGGAAAGGAAACTTGAGGATTATCCACCACCCTTCTCTGTTTTGGGAGTTAGTGTTCTAAAAGGCATCAGGATAGATGATATGTTGAAGGAGATAAGGGCAGGTTTAAGGAAGTGTATGGATCCCAATGAAGCATTATTGGCCTTGAGTGTGCCACCATGA 2577 0.4563 MSGSSVKYDLLFLSSTCCEPYSTHKGHVESRKSDKLKDVFRKTTESDSGGVNWIGLDPRYSWSQTCRCPRRIGSSPSFGSIQPTRNLLTTFSSTQPARNLSFSAAWEYPDPPPSTPRVFPSLIMDVEPRQYENLAINDNDIHNIVLSYLIHNCYKESVESFIACTGMKQPADYLEDMEKRKRIFHFALEGNALKAIELTEQLAQDILEMNKDLRFDLLSLHFVKLVCSRKCTEALEFAQTQLSPFGKEQKYIEKLEDFMALLAYKEPEKSPMFHLLSLEYRQQVADSLNRAILAHSNLPGYTAMERLIQQATVVRQCLSQEAGKDGPPPFSLKDFLKKSDTRILVSLSPYPSVTRTGDRTRIMVSLLPAPSSPSFSSIRFRETYLFSTRLLPPRSNQQGCNSGNFRWYTVKCRLLSGNVSPSSSPSTVIKEPHKYFDQAIITVRSGDGGHGAILSMPNQRVNSSQGKQEKQKTRKTSSFRRDFDGSLILPTGGLGGDVVIYADEEKDSLLEFHKKSRYNAKRGGNVAAMGVLTSQLRDGLAAPTLRIPVPVGTVVKRKRGKLLADLARPGDEILVVRGGQGGISLLEMPQHRRKKMMSLTTNVMRDDTDKVLSFGQPGQEVSLELILRVVADVGLVGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAAMYSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRLLVHVVDAAAENPVNDYRTVREELRMYNPEYLERPYIVVLNKIDLPEAKDRLPPLTEEILRIGTVSSPSEPNLSSEDPDQSSYNEGDIRERKLEDYPPPFSVLGVSVLKGIRIDDMLKEIRAGLRKCMDPNEALLALSVPP 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0666 858 MobiDBLite consensus disorder prediction 780 798 - -
Bisa05g0666 858 Pfam CTLH/CRA C-terminal to LisH motif domain 177 315 IPR024964 -
Bisa05g0666 858 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 632 846 IPR027417 -
Bisa05g0666 858 PRINTS GTP1/OBG GTP-binding protein family signature 654 672 IPR006073 GO:0005525
Bisa05g0666 858 PRINTS GTP1/OBG GTP-binding protein family signature 706 724 IPR006073 GO:0005525
Bisa05g0666 858 PRINTS GTP1/OBG GTP-binding protein family signature 689 704 IPR006073 GO:0005525
Bisa05g0666 858 PRINTS GTP1/OBG GTP-binding protein family signature 633 653 IPR006073 GO:0005525
Bisa05g0666 858 ProSitePatterns GTP1/OBG family signature. 691 704 IPR006074 GO:0005525
Bisa05g0666 858 CDD Obg 631 776 IPR031167 GO:0005525
Bisa05g0666 858 SUPERFAMILY Obg GTP-binding protein N-terminal domain 435 595 IPR036726 -
Bisa05g0666 858 Pfam GTP1/OBG 491 628 IPR006169 -
Bisa05g0666 858 Gene3D GTP1/OBG domain 434 629 IPR036726 -
Bisa05g0666 858 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 176 233 IPR006595 -
Bisa05g0666 858 MobiDBLite consensus disorder prediction 457 478 - -
Bisa05g0666 858 Pfam 50S ribosome-binding GTPase 632 759 IPR006073 GO:0005525
Bisa05g0666 858 MobiDBLite consensus disorder prediction 780 802 - -
Bisa05g0666 858 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 430 838 IPR045086 GO:0003924|GO:0005525
Bisa05g0666 858 Gene3D - 630 846 IPR027417 -
Bisa05g0666 858 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 631 842 IPR031167 GO:0005525
Bisa05g0666 858 SMART toby_final6 229 324 IPR013144 -
Bisa05g0666 858 SMART ctlh 176 233 IPR006595 -
Bisa05g0666 858 ProSiteProfiles LIS1 homology (LisH) motif profile. 137 169 IPR006594 GO:0005515
Bisa05g0666 858 ProSiteProfiles Obg domain profile. 433 630 IPR006169 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0666 Bisa-ChrBisa05 10926207 10959572 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0666 05 10926207 10959572 Bisa05g0666 05 10926207 10959572 ECH