Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0665 ATGCCCCGAATGAAGCGTATATGTGTGACGTCTCTTAATTGTTGTAATGTTGACCCTCAAGATAAATTGTCAGGACAAACAATATATTATACTAGAATCTTGCAATTACCAACCCACAGGATATTATTAAAGATTATTGGTGTTTCTATTCCTCTTATCCCCTCCTCCGAGATGCTCAAGTCAGGAATGGGAATTGAGGAGCGAAAGCAGGTGAAGAGGCCGGCTCAGGCCAGCTCCAGAAAAGGGTGCATGAGAGGGAAGGGTGGCCCCGAGAATGCGAGCTGCACCTACAAGGGTGTGAGGCAGAGAACCTGGGGCAAGTGGGTGGCTGAAATCCGCGAGCCCAACCGCGGGGCTCGTCTCTGGCTCGGCACATTCGAGACCTCCCATGAGGCTGCTCTCGCCTATGACGCTGCTGCTCGCAAGCTCTATGGATCAGAGGCCAAACTCAACCTCCCTGACCTCTCTCTCAATTCTAATTCTCACTCTCAGCCTCAGCCTCACCCTCCTTCTCCTCCTCCTCCCAATTCCTCTGCCCCCACCCACATTGACATTCCTCATATGATCCCAAACCAGCAGTTTCTTCACCCCTCGCCTCTTCCTCCACCACCCTCTTCCTTCAATGCCATGGCGCCCAACAACAACAACACTCCCCTCATGTCTGTCCCCATGCCTTCCCAGCACCAGATCGGAATCGGACCACTGTACAGCAACAACAGCTCCAGCTCCAGCTCAGGCTCCGCCATGTCAGTGCCCCTCAAAATAGAGGAGGACATTAAGCCGCTTCAGATGAAGGAGGAGGATTTTGGTCAATTCTGGGGGACAATGAACGACGGCCTGCCGGTGCCGGAGTTCAGCGATTCGATCTGGGCAGAGGCTGCCATGTCCCTGGATTTCCCTGTAATGCCAGATGCAGGGATATACGGCAAGGGGAATCTCGGAGATGTGAATGCTTGGGACACTATGCAGACTCCATGGTGCATGTGA 987 0.5309 MPRMKRICVTSLNCCNVDPQDKLSGQTIYYTRILQLPTHRILLKIIGVSIPLIPSSEMLKSGMGIEERKQVKRPAQASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFETSHEAALAYDAAARKLYGSEAKLNLPDLSLNSNSHSQPQPHPPSPPPPNSSAPTHIDIPHMIPNQQFLHPSPLPPPPSSFNAMAPNNNNTPLMSVPMPSQHQIGIGPLYSNNSSSSSSGSAMSVPLKIEEDIKPLQMKEEDFGQFWGTMNDGLPVPEFSDSIWAEAAMSLDFPVMPDAGIYGKGNLGDVNAWDTMQTPWCM 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0665 328 Pfam AP2 domain 96 145 IPR001471 GO:0003700|GO:0006355
Bisa05g0665 328 SUPERFAMILY DNA-binding domain 96 154 IPR016177 GO:0003677
Bisa05g0665 328 PRINTS Ethylene responsive element binding protein signature 97 108 IPR001471 GO:0003700|GO:0006355
Bisa05g0665 328 PRINTS Ethylene responsive element binding protein signature 119 135 IPR001471 GO:0003700|GO:0006355
Bisa05g0665 328 CDD AP2 95 155 IPR001471 GO:0003700|GO:0006355
Bisa05g0665 328 MobiDBLite consensus disorder prediction 154 217 - -
Bisa05g0665 328 Gene3D AP2/ERF domain 96 154 IPR036955 GO:0003700|GO:0006355
Bisa05g0665 328 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 70 243 - -
Bisa05g0665 328 FunFam Ethylene-responsive transcription factor 2 95 154 - -
Bisa05g0665 328 SMART rav1_2 96 159 IPR001471 GO:0003700|GO:0006355
Bisa05g0665 328 MobiDBLite consensus disorder prediction 67 95 - -
Bisa05g0665 328 MobiDBLite consensus disorder prediction 165 180 - -
Bisa05g0665 328 ProSiteProfiles AP2/ERF domain profile. 96 153 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0665 Bisa-ChrBisa05 10923183 10925850 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0665 72 177 AP2-EREBP Transcription Factor Family AT1G75490 74.528 3.50e-49 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa05g0665 AP2 1.2e-14 CL0081