Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0660 ATGTCCAAAAGACGTTGGACCAAAATAATATTGTCATCTACTTCCTCACTCAAATGGAAAATATCTCATTTTCATTACTCACAAGTCACAATGGGTCGCCGATCATGCTTGGCTATCTTCCTACTGTCCCTCTTATCCGCGGCGGTAGCGACGGCCGAGTTCATCGACGACGAAGATGACCTTCTGATCCGTCAGGTTGTTTCGGACGACGATGATCACTTGCTCAACGCCGAGCACCACTTCTCCAACTTCAAGGCTCAGTTTGACAAGACCTACGCTACAAAAGAGGAGCACGACTATCGCTTCGGTGTCTTCAAGGCTAACTTGCGCCGAGCCAAGTTGCACCAGAATCTCGATCCCTCCGCCGTCCACGGCGTGACCAAATTCTCCGATCTTACTCCCTCCGAATTCCGGCGGCAGTTCCTTGGCCTTAAGCCTCTTCGTCTTCCCGCCGATGCTCACAAGGCCCCGATCCTCCCTACTAATGATCTTCCTACTGATTTTGATTGGCGTGATCATGGAGCCGTTACTCCCGTCAAGGACCAGGGCTCATGCGGATCATGCTGGTCGTTTAGCGCCACCGGAGCACTGGAAGGAGCTCATTTTCTAAAGACTGGAGAGCTTGTGAGCCTTAGTGAGCAACAGCTCGTAGATTGCGACCACGAGTGTGACCCGGAAGAATACGGGGCATGTGACTCAGGGTGTAGTGGAGGGTTGATGACCAATGCATTTGAGTACACACTCAAAGCTGGTGGACTAGAACGAGAAGAAGACTATCCTTACACTGGAACAGACGGGGGCCAGTGCAAGTTTGACAAAAGCAAAATTGCTGCTTCTGTATCTAATTTCAGTGTGGTTTCCACTGATGAAGATCAAATTGCTGCAAATCTGGTTAAGAATGGTCCTCTTGCAGTTGGTATCAATGCAGTTTTTATGCAGACCTACGTTGGCGGAGTTTCGTGCCCATTCATCTGCACAAAGCGTTTGGATCATGGGGTTCTTCTTGCGGGTTATGGCTCTGCTGGTTATTCCCCTATTCGGTTTAAGGAAAAACCTTACTGGATTATAAAGAATTCATGGGGACAGAATTGGGGAGAGGACGGATATTACAAGATCTGCAGAGGTCGAAATATATGTGGCGTGGATTCCATGGTCTCAACAGTAACTGCAATACATATTTCTCCTGAATGA 1191 0.4861 MSKRRWTKIILSSTSSLKWKISHFHYSQVTMGRRSCLAIFLLSLLSAAVATAEFIDDEDDLLIRQVVSDDDDHLLNAEHHFSNFKAQFDKTYATKEEHDYRFGVFKANLRRAKLHQNLDPSAVHGVTKFSDLTPSEFRRQFLGLKPLRLPADAHKAPILPTNDLPTDFDWRDHGAVTPVKDQGSCGSCWSFSATGALEGAHFLKTGELVSLSEQQLVDCDHECDPEEYGACDSGCSGGLMTNAFEYTLKAGGLEREEDYPYTGTDGGQCKFDKSKIAASVSNFSVVSTDEDQIAANLVKNGPLAVGINAVFMQTYVGGVSCPFICTKRLDHGVLLAGYGSAGYSPIRFKEKPYWIIKNSWGQNWGEDGYYKICRGRNICGVDSMVSTVTAIHISPE 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0660 396 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 353 372 IPR025661 -
Bisa05g0660 396 FunFam Cysteine protease RD19A 61 389 - -
Bisa05g0660 396 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 182 193 IPR000169 -
Bisa05g0660 396 SUPERFAMILY Cysteine proteinases 78 388 IPR038765 -
Bisa05g0660 396 SMART Inhibitor_I29_2 81 137 IPR013201 -
Bisa05g0660 396 CDD Peptidase_C1A 165 388 IPR039417 -
Bisa05g0660 396 Pfam Papain family cysteine protease 164 387 IPR000668 GO:0006508|GO:0008234
Bisa05g0660 396 SMART pept_c1 164 389 IPR000668 GO:0006508|GO:0008234
Bisa05g0660 396 PRINTS Papain cysteine protease (C1) family signature 331 341 IPR000668 GO:0006508|GO:0008234
Bisa05g0660 396 PRINTS Papain cysteine protease (C1) family signature 353 359 IPR000668 GO:0006508|GO:0008234
Bisa05g0660 396 PRINTS Papain cysteine protease (C1) family signature 182 197 IPR000668 GO:0006508|GO:0008234
Bisa05g0660 396 Pfam Cathepsin propeptide inhibitor domain (I29) 81 137 IPR013201 -
Bisa05g0660 396 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 329 339 IPR025660 -
Bisa05g0660 396 Gene3D Cysteine proteinases 56 389 - -
Bisa05g0660 396 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 76 382 IPR013128 GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0660 Bisa-ChrBisa05 10826391 10829203 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0660 05 10826391 10829203 Bisa09g2011 09 31924271 31926302 CCT